new icons and settings.

Use transparent status bar color

Closes #2203

See merge request fdroid/fdroidclient!1029

.android2po

@@ -1,8 +0,0 @@
---gettext locale/
---groups strings array
-
---ignore about_sitec about_mailc
---ignore repo_add_http
---ignore /updateIntervalValues.*/
---ignore /dbSyncModeValues.*/
-

.gitattributes

@@ -0,0 +1 @@
+*.gpg           binary

.gitignore

@@ -1,10 +1,49 @@
+# Built application files
+*.apk
+*.ap_
+
+# Files for the Dalvik VM
+*.dex
+
+# Java class files
+*.class
+
+# Generated files
+bin/
+gen/
+build.xml
+
+# Gradle files
+.gradle/
+build/
+
+# Local configuration file (sdk path, etc)
 local.properties
-build.properties
-.classpath
-bin/*
-gen/*
-proguard.cfg
+
+# Proguard folder generated by Eclipse
+proguard/
+
+# Log Files
+*.log
+
+# Editor swap/save files
 *~
-.idea
+*.swp
+
+# More IDE stuff
+.idea/
 *.iml
 out
+.settings/
+
+# Imported libs
+extern/*/libs/
+extern/*/*/libs/
+
+# Tests
+junit-report.xml
+
+# Screen dumps from Android Studio/DDMS
+captures/
+
+/fdroid/

.gitlab-ci.yml

@@ -0,0 +1,142 @@
+stages:
+  - test
+  - deploy
+
+.base:
+  image: registry.gitlab.com/fdroid/ci-images-client:latest
+  before_script:
+    - export GRADLE_USER_HOME=$PWD/.gradle
+    - export ANDROID_COMPILE_SDK=`sed -n 's,.*compileSdkVersion\s*\([0-9][0-9]*\).*,\1,p' app/build.gradle`
+    - alias sdkmanager="sdkmanager --no_https"
+    - echo y | sdkmanager "platforms;android-${ANDROID_COMPILE_SDK}" > /dev/null
+    # limit RAM usage for all gradle runs
+    - export maxmem=$(expr $(sed -n 's,^MemAvailable:[^0-9]*\([0-9][0-9]*\)[^0-9]*$,\1,p' /proc/meminfo) / 1024 / 2 / 1024 \* 1024)
+    - printf "\norg.gradle.jvmargs=-Xmx${maxmem}m -XX:MaxPermSize=${maxmem}m\norg.gradle.daemon=false\norg.gradle.parallel=false\n" >> gradle.properties
+  after_script:
+    # this file changes every time but should not be cached
+    - rm -f $GRADLE_USER_HOME/caches/modules-2/modules-2.lock
+    - rm -fr $GRADLE_USER_HOME/caches/*/plugin-resolution/
+  cache:
+    paths:
+      - .gradle/wrapper
+      - .gradle/caches
+
+.test-template: &test-template
+  extends: .base
+  stage: test
+  artifacts:
+    name: "${CI_PROJECT_PATH}_${CI_JOB_STAGE}_${CI_COMMIT_REF_NAME}_${CI_COMMIT_SHA}"
+    paths:
+      - kernel.log
+      - logcat.txt
+      - app/core*
+      - app/*.log
+      - app/build/reports
+      - app/build/outputs/*ml
+      - app/build/outputs/apk
+    expire_in: 1 week
+    when: on_failure
+  after_script:
+    - echo "Download debug artifacts from https://gitlab.com/${CI_PROJECT_PATH}/-/jobs"
+
+# Run the most important first. Then we can decide whether to ignore
+# the style tests if the rest of the more meaningful tests pass.
+test_lint_pmd_checkstyle:
+  <<: *test-template
+  script:
+    - export EXITVALUE=0
+    - function set_error() { export EXITVALUE=1; printf "\x1b[31mERROR `history|tail -2|head -1|cut -b 6-500`\x1b[0m\n"; }
+    - ./gradlew assemble
+    # always report on lint errors to the build log
+    - sed -i -e 's,textReport .*,textReport true,' app/build.gradle
+    - ./gradlew testFullDebugUnitTest || set_error
+    - ./gradlew lint || set_error
+    - ./gradlew pmd || set_error
+    - ./gradlew checkstyle || set_error
+    - ./tools/check-format-strings.py || set_error
+    - ./tools/check-fastlane-whitespace.py || set_error
+    - ./tools/remove-unused-and-blank-translations.py || set_error
+    - echo "These are unused or blank translations that should be removed:"
+    - git --no-pager diff --ignore-all-space --name-only --exit-code app/src/*/res/values*/strings.xml || set_error
+    - exit $EXITVALUE
+
+errorprone:
+  extends: .base
+  stage: test
+  script:
+    - apt-get update
+    - apt-get install -t stretch-backports openjdk-11-jdk-headless
+    - update-java-alternatives --set java-1.11.0-openjdk-amd64
+    - export JAVA_HOME=/usr/lib/jvm/java-1.11.0-openjdk-amd64
+    - cat config/errorprone.gradle >> app/build.gradle
+    - ./gradlew -Dorg.gradle.dependency.verification=lenient assembleDebug
+
+# Run the tests in the emulator.  Each step is broken out to run on
+# its own since the CI runner can have limited RAM, and the emulator
+# can take a while to start.
+#
+# once these prove stable, the task should be switched to
+# connectedCheck to test all the build flavors
+.connected-template: &connected-template
+  extends: .base
+  script:
+    - ./gradlew assembleFullDebug
+    - export AVD_SDK=`echo $CI_JOB_NAME | awk '{print $2}'`
+    - export AVD_TAG=`echo $CI_JOB_NAME | awk '{print $3}'`
+    - export AVD_ARCH=`echo $CI_JOB_NAME | awk '{print $4}'`
+    - export AVD_PACKAGE="system-images;android-${AVD_SDK};${AVD_TAG};${AVD_ARCH}"
+    - echo $AVD_PACKAGE
+
+    - alias sdkmanager
+    - ls -l ~/.android
+
+    - adb start-server
+    - start-emulator
+    - wait-for-emulator
+    - adb devices
+    - adb shell input keyevent 82 &
+    - ./gradlew installFullDebug
+    - adb shell am start -n org.fdroid.fdroid.debug/org.fdroid.fdroid.views.main.MainActivity
+    - if [ $AVD_SDK -lt 25 ] || ! emulator -accel-check; then
+          export FLAG=-Pandroid.testInstrumentationRunnerArguments.notAnnotation=androidx.test.filters.LargeTest;
+      fi
+    - ./gradlew connectedFullDebugAndroidTest $FLAG
+
+no-accel 22 default x86:
+  <<: *test-template
+  <<: *connected-template
+
+.kvm-template: &kvm-template
+  tags:
+    - fdroid
+    - kvm
+  only:
+    variables:
+      - $RUN_KVM_JOBS
+  <<: *test-template
+  <<: *connected-template
+
+kvm 29 microg x86_64:
+  <<: *kvm-template
+
+deploy_nightly:
+  extends: .base
+  stage: deploy
+  only:
+    - master
+  script:
+    - test -z "$DEBUG_KEYSTORE" && exit 0
+    - sed -i
+        's,<string name="app_name">.*</string>,<string name="app_name">F-Nightly</string>,'
+        app/src/main/res/values*/strings.xml
+    # add this nightly repo as a enabled repo
+    - sed -i -e '/<\/string-array>/d' -e '/<\/resources>/d' app/src/main/res/values/default_repos.xml
+    - echo "<item>${CI_PROJECT_PATH}-nightly</item>" >> app/src/main/res/values/default_repos.xml
+    - echo "<item>${CI_PROJECT_URL}-nightly/raw/master/fdroid/repo</item>" >> app/src/main/res/values/default_repos.xml
+    - cat config/nightly-repo/repo.xml >> app/src/main/res/values/default_repos.xml
+    - export DB=`sed -n 's,.*DB_VERSION *= *\([0-9][0-9]*\).*,\1,p' app/src/main/java/org/fdroid/fdroid/data/DBHelper.java`
+    - export versionCode=`printf '%d%05d' $DB $(date '+%s'| cut -b4-8)`
+    - sed -i "s,^\(\s*versionCode\)  *[0-9].*,\1 $versionCode," app/build.gradle
+    # build the APKs!
+    - ./gradlew assembleDebug
+    - fdroid nightly -v

.gitmodules

@@ -1,4 +0,0 @@
-[submodule "extern/Universal-Image-Loader"]
-	path = extern/Universal-Image-Loader
-	url = https://github.com/nostra13/Android-Universal-Image-Loader
-    ignore = dirty

.project

@@ -1,33 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<projectDescription>
-	<name>fdroid</name>
-	<comment></comment>
-	<projects>
-	</projects>
-	<buildSpec>
-		<buildCommand>
-			<name>com.android.ide.eclipse.adt.ResourceManagerBuilder</name>
-			<arguments>
-			</arguments>
-		</buildCommand>
-		<buildCommand>
-			<name>com.android.ide.eclipse.adt.PreCompilerBuilder</name>
-			<arguments>
-			</arguments>
-		</buildCommand>
-		<buildCommand>
-			<name>org.eclipse.jdt.core.javabuilder</name>
-			<arguments>
-			</arguments>
-		</buildCommand>
-		<buildCommand>
-			<name>com.android.ide.eclipse.adt.ApkBuilder</name>
-			<arguments>
-			</arguments>
-		</buildCommand>
-	</buildSpec>
-	<natures>
-		<nature>com.android.ide.eclipse.adt.AndroidNature</nature>
-		<nature>org.eclipse.jdt.core.javanature</nature>
-	</natures>
-</projectDescription>

.weblate

@@ -0,0 +1,3 @@
+[weblate]
+url = https://hosted.weblate.org/api/
+translation = f-droid/f-droid

Android.mk

@@ -0,0 +1,26 @@
+LOCAL_PATH:= $(call my-dir)
+
+include $(CLEAR_VARS)
+
+LOCAL_MODULE := F-Droid
+LOCAL_MODULE_TAGS := optional
+LOCAL_PACKAGE_NAME := F-Droid
+
+fdroid_root  := $(LOCAL_PATH)
+fdroid_dir   := app
+fdroid_out   := $(PWD)/$(OUT_DIR)/target/common/obj/APPS/$(LOCAL_MODULE)_intermediates
+fdroid_build := $(fdroid_root)/$(fdroid_dir)/build
+fdroid_apk   := build/outputs/apk/full/release/$(fdroid_dir)-full-release-unsigned.apk
+
+$(fdroid_root)/$(fdroid_dir)/$(fdroid_apk):
+	rm -Rf $(fdroid_build)
+	mkdir -p $(fdroid_out)
+	ln -sf $(fdroid_out) $(fdroid_build)
+	cd $(fdroid_root)/$(fdroid_dir) && gradle assembleRelease
+
+LOCAL_CERTIFICATE := platform
+LOCAL_SRC_FILES := $(fdroid_dir)/$(fdroid_apk)
+LOCAL_MODULE_CLASS := APPS
+LOCAL_MODULE_SUFFIX := $(COMMON_ANDROID_PACKAGE_SUFFIX)
+
+include $(BUILD_PREBUILT)

AndroidManifest.xml

@@ -1,180 +0,0 @@
-<?xml version="1.0" encoding="utf-8"?>
-<manifest xmlns:android="http://schemas.android.com/apk/res/android"
-    package="org.fdroid.fdroid"
-    android:installLocation="auto"
-    android:versionCode="52"
-    android:versionName="0.52-test" >
-
-    <uses-sdk
-        android:minSdkVersion="4"
-        android:targetSdkVersion="18" />
-
-    <supports-screens
-        android:anyDensity="true"
-        android:largeScreens="true"
-        android:normalScreens="true"
-        android:resizeable="true"
-        android:smallScreens="true"
-        android:xlargeScreens="true" />
-
-    <uses-feature
-        android:name="android.hardware.touchscreen"
-        android:required="false" />
-
-    <uses-permission android:name="android.permission.INTERNET" />
-    <uses-permission android:name="android.permission.RECEIVE_BOOT_COMPLETED" />
-    <uses-permission android:name="android.permission.WRITE_EXTERNAL_STORAGE" />
-
-    <application
-        android:name="FDroidApp"
-        android:icon="@drawable/ic_launcher"
-        android:label="@string/app_name"
-        android:allowBackup="true"
-        android:supportsRtl="false" >
-        <activity
-            android:name="FDroid"
-            android:configChanges="keyboardHidden|orientation|screenSize" >
-
-            <intent-filter>
-                <action android:name="android.intent.action.MAIN" />
-
-                <category android:name="android.intent.category.LAUNCHER" />
-            </intent-filter>
-
-            <intent-filter>
-                <action android:name="android.intent.action.VIEW" />
-
-                <category android:name="android.intent.category.DEFAULT" />
-                <category android:name="android.intent.category.BROWSABLE" />
-
-                <data android:scheme="http" android:host="f-droid.org"
-                    android:pathPrefix="/repository/browse" />
-                <data android:scheme="https" android:host="f-droid.org"
-                    android:pathPrefix="/repository/browse" />
-                <data android:scheme="http" android:host="www.f-droid.org"
-                    android:pathPrefix="/repository/browse" />
-                <data android:scheme="https" android:host="www.f-droid.org"
-                    android:pathPrefix="/repository/browse" />
-            </intent-filter>
-
-            <meta-data
-                android:name="android.app.default_searchable"
-                android:value=".SearchResults" />
-        </activity>
-
-        <activity
-            android:name="ManageRepo"
-            android:label="@string/menu_manage"
-            android:parentActivityName="FDroid" >
-        </activity>
-
-        <activity android:name="Settings" />
-
-        <activity
-            android:name="AppDetails"
-            android:label="@string/app_details"
-            android:exported="true"
-            android:parentActivityName="FDroid" >
-
-            <intent-filter>
-                <action android:name="android.intent.action.VIEW" />
-
-                <category android:name="android.intent.category.DEFAULT" />
-                <category android:name="android.intent.category.BROWSABLE" />
-
-                <data android:scheme="fdroid.app" />
-            </intent-filter>
-
-            <intent-filter>
-                <action android:name="android.intent.action.VIEW" />
-
-                <category android:name="android.intent.category.DEFAULT" />
-                <category android:name="android.intent.category.BROWSABLE" />
-
-                <data android:scheme="market" android:host="details" />
-            </intent-filter>
-
-            <intent-filter>
-                <action android:name="android.intent.action.VIEW" />
-
-                <category android:name="android.intent.category.DEFAULT" />
-                <category android:name="android.intent.category.BROWSABLE" />
-
-                <data android:scheme="http" android:host="f-droid.org"
-                    android:pathPrefix="/app/" />
-                <data android:scheme="https" android:host="f-droid.org"
-                    android:pathPrefix="/app/" />
-                <data android:scheme="http" android:host="www.f-droid.org"
-                    android:pathPrefix="/app/" />
-                <data android:scheme="https" android:host="www.f-droid.org"
-                    android:pathPrefix="/app/" />
-            </intent-filter>
-            <meta-data
-                android:name="android.support.PARENT_ACTIVITY"
-                android:value="FDroid" />
-        </activity>
-        <activity
-            android:label="@string/menu_preferences"
-            android:name=".PreferencesActivity"
-            android:parentActivityName="FDroid" >
-            <meta-data
-                android:name="android.support.PARENT_ACTIVITY"
-                android:value="FDroid" />
-        </activity>
-        <activity
-            android:name="SearchResults"
-            android:label="@string/search_results"
-            android:exported="true"
-            android:launchMode="singleTop"
-            android:parentActivityName="FDroid" >
-            <intent-filter>
-                <action android:name="android.intent.action.SEARCH" />
-            </intent-filter>
-
-            <intent-filter>
-                <action android:name="android.intent.action.VIEW" />
-
-                <category android:name="android.intent.category.DEFAULT" />
-                <category android:name="android.intent.category.BROWSABLE" />
-
-                <data android:scheme="fdroid.search" />
-            </intent-filter>
-
-            <intent-filter>
-                <action android:name="android.intent.action.VIEW" />
-
-                <category android:name="android.intent.category.DEFAULT" />
-                <category android:name="android.intent.category.BROWSABLE" />
-
-                <data android:scheme="market" android:host="search" />
-            </intent-filter>
-
-            <meta-data
-                android:name="android.app.searchable"
-                android:resource="@xml/searchable" />
-            <meta-data
-                android:name="android.support.PARENT_ACTIVITY"
-                android:value="FDroid" />
-        </activity>
-
-        <receiver android:name="StartupReceiver" >
-            <intent-filter>
-                <action android:name="android.intent.action.BOOT_COMPLETED" />
-
-                <category android:name="android.intent.category.HOME" />
-            </intent-filter>
-        </receiver>
-        <receiver android:name="PackageReceiver" >
-            <intent-filter>
-                <action android:name="android.intent.action.PACKAGE_ADDED" />
-                <action android:name="android.intent.action.PACKAGE_UPGRADED" />
-                <action android:name="android.intent.action.PACKAGE_REMOVED" />
-
-                <data android:scheme="package" />
-            </intent-filter>
-        </receiver>
-
-        <service android:name="UpdateService" />
-    </application>
-
-</manifest>

CONTRIBUTING.md

@@ -0,0 +1,81 @@
+# Contributing
+
+## Reporting issues
+
+If you find an issue in the client, you can use our [Issue
+Tracker](https://gitlab.com/fdroid/fdroidclient/issues). Make sure that it
+hasn't yet been reported by searching first.
+
+Remember to include the following information:
+
+* Android version
+* Device model
+* F-Droid version
+* Steps to reproduce the issue
+* Logcat - see [instructions](https://f-droid.org/wiki/page/Getting_logcat_messages_after_crash)
+
+## Translating
+
+The strings are translated using [Weblate](https://weblate.org/en/). Follow
+[these instructions](https://hosted.weblate.org/engage/f-droid/) if you would
+like to contribute.
+
+Please *do not* send merge requests or patches modifying the translations. Use
+Weblate instead - it applies a series of fixes and suggestions, plus it keeps
+track of modifications and fuzzy translations. Applying translations manually
+skips all of the fixes and checks, and overrides the fuzzy state of strings.
+
+Note that you cannot change the English strings on Weblate. If you have any
+suggestions on how to improve them, open an issue or merge request like you
+would if you were making code changes. This way the changes can be reviewed
+before the source strings on Weblate are changed.
+
+
+## Code Style
+
+We follow the default Android Studio code formatter (e.g. `Ctrl-Alt-L`).  This
+should be more or less the same as [Android Java
+style](https://source.android.com/source/code-style.html).  Some key points:
+
+* Four space indentation
+* UTF-8 source files
+* Exactly one top-level class per file
+* No wildcard imports
+* One statement per line
+* K&R spacings with braces and parenthesis
+* Commented fallthroughs
+* Braces are always used after if, for and while
+
+The current code base doesn't follow it entirely, but new code should follow
+it. We enforce some of these, but not all, via `./gradlew checkstyle`.
+
+
+## Running the test suite
+
+Before pushing commits to a merge request, make sure this passes:
+
+    ./gradlew checkstyle pmd lint
+
+In order to run the F-Droid test suite, you will need to have either a real device
+connected via `adb`, or an emulator running. Then, execute the following from the
+command line:
+
+    ./gradlew check
+
+Many important tests require a device or emulator, but do not work in GitLab CI.
+That mean they need to be run locally, and that is usually easiest in Android
+Studio rather than the command line.
+
+For a quick way to run a specific JUnit/Robolectric test:
+
+    ./gradlew testFullDebugUnitTest --tests *LocaleSelectionTest*
+
+For a quick way to run a specific emulator test:
+
+	./gradlew connectedFullDebugAndroidTest \
+        -Pandroid.testInstrumentationRunnerArguments.class=org.fdroid.fdroid.MainActivityExpressoTest
+
+
+## Making releases
+
+See https://gitlab.com/fdroid/wiki/-/wikis/Internal/Release-Process#fdroidclient

FUNDING.yml

@@ -0,0 +1,11 @@
+---
+liberapay: F-Droid-Data
+open_collective: F-Droid
+github:
+    - f-droid
+    - eighthave
+custom:
+    - https://f-droid.org/donate/
+    - https://www.hellotux.com/f-droid
+    - https://www.paypal.com/cgi-bin/webscr?cmd=_s-xclick&hosted_button_id=E2FCXCT6837GL
+    - https://blockchain.info/address/15u8aAPK4jJ5N8wpWJ5gutAyyeHtKX5i18

README.md

@@ -1,43 +1,67 @@
-F-Droid Client
-==============
+# F-Droid Client
 
-Client for [F-Droid](https://fdroid.org), the Free Software repository system
+[![build status](https://gitlab.com/fdroid/fdroidclient/badges/master/pipeline.svg)](https://gitlab.com/fdroid/fdroidclient/-/jobs)
+[![Translation status](https://hosted.weblate.org/widgets/f-droid/-/svg-badge.svg)](https://hosted.weblate.org/engage/f-droid/)
+
+Client for [F-Droid](https://f-droid.org), the Free Software repository system
 for Android.
 
+## Building with Gradle
 
-Building from source
---------------------
+    ./gradlew assembleRelease
 
-The only required tools are the Android SDK and Apache Ant.
-
-```
-git submodule update --init
-android update project -p .
-android update project -p extern/Universal-Image-Loader/library
-ant clean release
-```
-
-
-Direct download
----------------
+## Direct download
 
 You can [download the application](https://f-droid.org/FDroid.apk) directly
-from our site.
+from our site or [browse it in the repo](https://f-droid.org/app/org.fdroid.fdroid).
 
+## Contributing
 
-Contributing
-------------
+See our [Contributing doc](CONTRIBUTING.md) for information on how to report
+issues, translate the app into your language or help with development.
 
-You are welcome to submit Merge Requests via the Gitorious web interface. You
-can also follow our [Issue tracker](https://f-droid.org/repository/issues/)
-and our [Forums](https://f-droid.org/forums/).
+## IRC
 
+We are on `#fdroid` and `#fdroid-dev` on Freenode. We hold weekly dev meetings
+on `#fdroid-dev` on Thursdays at 11:30h UTC, which usually last half an hour.
 
-License
--------
+## FAQ
+
+* Why does F-Droid require "Unknown Sources" to install apps by default?
+
+Because a regular Android app cannot act as a package manager on its
+own. To do so, it would require system privileges (see below), similar
+to what Google Play does.
+
+* Can I avoid enabling "Unknown Sources" by installing F-Droid as a
+  privileged system app?
+
+This used to be the case, but no longer is. Now the [Privileged
+Extension](https://gitlab.com/fdroid/privileged-extension) is the one that should be placed in
+the system. It can be bundled with a ROM or installed via a zip.
+## License
 
 This program is Free Software: You can use, study share and improve it at your
 will. Specifically you can redistribute and/or modify it under the terms of the
 [GNU General Public License](https://www.gnu.org/licenses/gpl.html) as
 published by the Free Software Foundation, either version 3 of the License, or
 (at your option) any later version.
+
+Some icons are made by [Picol](http://www.flaticon.com/authors/picol),
+[Icomoon](http://www.flaticon.com/authors/icomoon) or
+[Dave Gandy](http://www.flaticon.com/authors/dave-gandy) from
+[Flaticon](http://www.flaticon.com) or by Google and are licensed by
+[Creative Commons BY 3.0](https://creativecommons.org/licenses/by/3.0/).
+
+Other icons are from the
+[Material Design Icon set](https://github.com/google/material-design-icons)
+released under an
+[Attribution 4.0 International license](https://creativecommons.org/licenses/by/4.0/).
+
+
+## Translation
+
+Everything can be translated.  See
+[Translation and Localization](https://f-droid.org/docs/Translation_and_Localization)
+for more info.
+[![translation status](https://hosted.weblate.org/widgets/f-droid/-/f-droid/multi-auto.svg)](https://hosted.weblate.org/engage/f-droid/?utm_source=widget)

app/build.gradle

@@ -0,0 +1,230 @@
+apply plugin: 'com.android.application'
+apply plugin: 'checkstyle'
+apply plugin: 'pmd'
+
+/* gets the version name from the latest Git tag */
+def getVersionName = { ->
+    def stdout = new ByteArrayOutputStream()
+    exec {
+        commandLine 'git', 'describe', '--tags', '--always'
+        standardOutput = stdout
+    }
+    return stdout.toString().trim()
+}
+
+def isCi = "true" == System.getenv("CI")
+def preDexEnabled = "true" == System.getProperty("pre-dex", "true")
+
+def fullApplicationId = "org.fdroid.fdroid"
+def basicApplicationId = "org.fdroid.basic"
+// yes, this actually needs both quotes https://stackoverflow.com/a/41391841
+def privilegedExtensionApplicationId = '"org.fdroid.fdroid.privileged"'
+
+android {
+    compileSdkVersion 30
+
+    defaultConfig {
+        versionCode 1013001
+        versionName getVersionName()
+
+        testInstrumentationRunner 'androidx.test.runner.AndroidJUnitRunner'
+        minSdkVersion 24
+        //noinspection ExpiredTargetSdkVersion
+        targetSdkVersion 28
+        /*
+          The Android Testing Support Library collects analytics to continuously improve the testing
+          experience. More specifically, it uploads a hash of the package name of the application
+          under test for each invocation. If you do not wish to upload this data, you can opt-out by
+          passing the following argument to the test runner: disableAnalytics "true".
+         */
+        testInstrumentationRunnerArguments disableAnalytics: 'true'
+        vectorDrawables.useSupportLibrary = true
+    }
+
+    buildTypes {
+        // use proguard on debug too since we have unknowingly broken
+        // release builds before.
+        all {
+            minifyEnabled true
+            shrinkResources true
+            buildConfigField "String", "PRIVILEGED_EXTENSION_PACKAGE_NAME", privilegedExtensionApplicationId
+            buildConfigField "String", "ACRA_REPORT_EMAIL", '"reports@f-droid.org"' // String needs both quotes
+            proguardFiles getDefaultProguardFile('proguard-android.txt'), 'proguard-rules.pro'
+            testProguardFiles getDefaultProguardFile('proguard-android.txt'), 'proguard-rules.pro', 'src/androidTest/proguard-rules.pro'
+        }
+        debug {
+            applicationIdSuffix ".debug"
+            resValue "string", "applicationId", fullApplicationId + applicationIdSuffix
+            versionNameSuffix "-debug"
+            println 'buildTypes.debug defaultConfig.versionCode ' + defaultConfig.versionCode
+        }
+    }
+
+    flavorDimensions "base"
+    productFlavors {
+        full {
+            dimension "base"
+            applicationId fullApplicationId
+            resValue "string", "applicationId", fullApplicationId
+        }
+        basic {
+            dimension "base"
+            applicationId basicApplicationId
+            resValue "string", "applicationId", basicApplicationId
+        }
+    }
+
+    compileOptions {
+        compileOptions.encoding = "UTF-8"
+        sourceCompatibility JavaVersion.VERSION_1_8
+        targetCompatibility JavaVersion.VERSION_1_8
+    }
+
+    aaptOptions {
+        cruncherEnabled = false
+    }
+
+    dexOptions {
+        // Improve build server performance by allowing disabling of pre-dexing
+        // see http://tools.android.com/tech-docs/new-build-system/tips#TOC-Improving-Build-Server-performance
+        // Skip pre-dexing when running on CI or when disabled via -Dpre-dex=false.
+        preDexLibraries = preDexEnabled && !isCi
+    }
+
+    testOptions {
+        unitTests {
+            includeAndroidResources = true
+            // prevent tests from dying on android.util.Log calls
+            returnDefaultValues = true
+            all {
+                // All the usual Gradle options.
+                testLogging {
+                    events "skipped", "failed", "standardOut", "standardError"
+                    showStandardStreams = true
+                }
+                systemProperty 'robolectric.dependency.repo.url', 'https://repo1.maven.org/maven2'
+
+                // hack to avoid memory leak crashes
+                forkEvery = 1
+            }
+        }
+    }
+
+    sourceSets {
+        test {
+            java.srcDirs += "$projectDir/src/testShared/java"
+        }
+
+        androidTest {
+            java.srcDirs += "$projectDir/src/testShared/java"
+        }
+    }
+
+    lintOptions {
+        checkReleaseBuilds false
+        abortOnError true
+
+        htmlReport true
+        xmlReport false
+        textReport false
+
+        lintConfig file("lint.xml")
+    }
+
+    packagingOptions {
+        exclude 'META-INF/LICENSE'
+        exclude 'META-INF/LICENSE.txt'
+        exclude 'META-INF/NOTICE'
+        exclude 'META-INF/NOTICE.txt'
+        exclude 'META-INF/INDEX.LIST'
+        exclude '.readme'
+    }
+}
+
+dependencies {
+    implementation 'androidx.appcompat:appcompat:1.3.0'
+    implementation 'androidx.preference:preference:1.1.1'
+    implementation 'androidx.gridlayout:gridlayout:1.0.0'
+    implementation 'androidx.recyclerview:recyclerview:1.1.0'
+    implementation 'androidx.cardview:cardview:1.0.0'
+    implementation 'androidx.vectordrawable:vectordrawable:1.1.0'
+    implementation 'androidx.constraintlayout:constraintlayout:1.1.3'
+    implementation 'androidx.palette:palette:1.0.0'
+    implementation 'androidx.work:work-runtime:2.4.0'
+
+    implementation 'com.google.android.material:material:1.3.0'
+
+    implementation 'com.nostra13.universalimageloader:universal-image-loader:1.9.5'
+    implementation 'com.google.zxing:core:3.3.3'
+    implementation 'info.guardianproject.netcipher:netcipher:2.2.0-alpha'
+    implementation 'info.guardianproject.panic:panic:1.0'
+    implementation 'commons-io:commons-io:2.6'
+    implementation 'commons-net:commons-net:3.6'
+    implementation 'ch.acra:acra:4.9.1'
+    implementation 'com.hannesdorfmann:adapterdelegates3:3.0.1'
+
+    implementation 'io.reactivex.rxjava3:rxandroid:3.0.0'
+    implementation 'io.reactivex.rxjava3:rxjava:3.0.9'
+
+    implementation 'com.fasterxml.jackson.core:jackson-core:2.11.1'
+    implementation 'com.fasterxml.jackson.core:jackson-annotations:2.11.1'
+    implementation 'com.fasterxml.jackson.core:jackson-databind:2.11.1'
+
+    implementation 'org.bouncycastle:bcprov-jdk15on:1.65'
+    fullImplementation 'org.bouncycastle:bcpkix-jdk15on:1.65'
+    fullImplementation 'cc.mvdan.accesspoint:library:0.2.0'
+    fullImplementation 'org.jmdns:jmdns:3.5.5'
+    fullImplementation 'org.nanohttpd:nanohttpd:2.3.1'
+
+    testImplementation 'androidx.test:core:1.3.0'
+    testImplementation 'junit:junit:4.13.1'
+    testImplementation 'org.robolectric:robolectric:4.3'
+    testImplementation 'org.mockito:mockito-core:3.3.3'
+    testImplementation 'org.hamcrest:hamcrest:2.2'
+    testImplementation 'org.bouncycastle:bcprov-jdk15on:1.65'
+
+    androidTestImplementation 'androidx.arch.core:core-testing:2.1.0'
+    androidTestImplementation 'androidx.test:core:1.3.0'
+    androidTestImplementation 'androidx.test:runner:1.3.0'
+    androidTestImplementation 'androidx.test:rules:1.3.0'
+    androidTestImplementation 'androidx.test:monitor:1.3.0'
+    androidTestImplementation 'androidx.test.ext:junit:1.1.2'
+    androidTestImplementation 'androidx.test.espresso:espresso-core:3.3.0'
+    androidTestImplementation 'androidx.test.uiautomator:uiautomator:2.2.0'
+    androidTestImplementation 'androidx.work:work-testing:2.4.0'
+}
+
+checkstyle {
+    toolVersion = '7.2'
+}
+
+task checkstyle(type: Checkstyle) {
+    configFile file("${project.rootDir}/config/checkstyle/checkstyle.xml")
+    source 'src/main/java', 'src/test/java', 'src/androidTest/java'
+    include '**/*.java'
+
+    classpath = files()
+}
+
+pmd {
+    toolVersion = '6.20.0'
+    consoleOutput = true
+}
+
+task pmdMain(type: Pmd) {
+    dependsOn 'assembleDebug'
+    ruleSetFiles = files("${project.rootDir}/config/pmd/rules.xml", "${project.rootDir}/config/pmd/rules-main.xml")
+    ruleSets = [] // otherwise defaults clash with the list in rules.xml
+    source 'src/main/java'
+    include '**/*.java'
+}
+
+task pmdTest(type: Pmd) {
+    dependsOn 'assembleDebug'
+    ruleSetFiles = files("${project.rootDir}/config/pmd/rules.xml", "${project.rootDir}/config/pmd/rules-test.xml")
+    ruleSets = [] // otherwise defaults clash with the list in rules.xml
+    source 'src/test/java', 'src/androidTest/java'
+    include '**/*.java'
+}
+
+task pmd(dependsOn: [pmdMain, pmdTest]) {}

app/lint.xml

@@ -0,0 +1,67 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<lint>
+    <!-- Our translations are crowd-sourced -->
+    <issue id="MissingTranslation" severity="ignore"/>
+
+    <!-- to make CI fail on errors until this is fixed
+         https://github.com/rtyley/spongycastle/issues/7 -->
+    <issue id="InvalidPackage" severity="warning"/>
+
+    <issue id="ImpliedQuantity" severity="error"/>
+    <issue id="DefaultLocale" severity="error"/>
+    <issue id="SimpleDateFormat" severity="error"/>
+    <issue id="NewApi" severity="error"/>
+    <issue id="InlinedApi" severity="error"/>
+
+    <!-- These are important to us, so promote from warning to error -->
+    <issue id="UnusedResources" severity="error">
+        <ignore path="src/main/res/drawable/category_**.png" />
+        <ignore path="src/main/res/values/dimens.xml"/>
+        <ignore path="src/main/res/values/styles.xml"/>
+        <ignore path="src/full/res/values/styles.xml"/>
+        <!-- keep a single strings.xml for all build flavors -->
+        <ignore path="src/main/res/values**/strings.xml"/>
+    </issue>
+    <issue id="AppCompatMethod" severity="error"/>
+    <issue id="NestedScrolling" severity="error"/>
+    <issue id="Typos" severity="error"/>
+    <issue id="StringFormatCount" severity="error"/>
+    <issue id="UnsafeProtectedBroadcastReceiver" severity="error"/>
+    <issue id="GetInstance" severity="error"/>
+    <issue id="PackageManagerGetSignatures" severity="error"/>
+    <issue id="HardwareIds" severity="error"/>
+    <issue id="TrustAllX509TrustManager" severity="error">
+      <!-- these come from included libraries -->
+        <ignore path="org/apache/commons/net/ftp/FTPSTrustManager.class"/>
+        <ignore path="org/bouncycastle/est/jcajce/JcaJceUtils$1.class"/>
+        <ignore path="org/bouncycastle/est/jcajce/JcaJceUtils$2.class"/>
+        <ignore path="org/apache/commons/net/util/TrustManagerUtils$TrustManager.class"/>
+    </issue>
+
+    <issue id="PluralsCandidate" severity="error"/>
+    <issue id="HardcodedText" severity="error"/>
+    <issue id="RtlCompat" severity="error"/>
+    <issue id="RtlEnabled" severity="error"/>
+
+    <!-- both the correct and deprecated locales need to be present for
+         them to be recognized on all devices -->
+    <issue id="LocaleFolder" severity="error">
+        <ignore path="src/main/res/values-he"/>
+        <ignore path="src/main/res/values-id"/>
+    </issue>
+
+    <issue id="SetWorldReadable" severity="error">
+        <ignore path="src/main/java/org/fdroid/fdroid/installer/ApkFileProvider.java"/>
+    </issue>
+
+    <issue id="ProtectedPermissions" severity="error">
+        <ignore path="src/debug/AndroidManifest.xml"/>
+        <ignore path="src/full/AndroidManifest.xml"/>
+    </issue>
+
+    <!-- these should be fixed, but it'll be a chunk of work -->
+    <issue id="SetTextI18n" severity="error">
+        <ignore path="src/main/java/org/fdroid/fdroid/views/AppDetailsRecyclerViewAdapter.java"/>
+        <ignore path="src/main/java/org/fdroid/fdroid/views/apps/AppListItemController.java"/>
+    </issue>
+</lint>

app/proguard-rules.pro

@@ -0,0 +1,47 @@
+-dontobfuscate
+-dontoptimize
+-keepattributes SourceFile,LineNumberTable,Exceptions
+-keep class org.fdroid.fdroid.** {*;}
+-dontskipnonpubliclibraryclassmembers
+-dontwarn android.test.**
+
+-dontwarn javax.naming.**
+-dontwarn org.slf4j.**
+-dontnote org.apache.http.**
+-dontnote android.net.http.**
+-dontnote **ILicensingService
+
+# Needed for espresso https://stackoverflow.com/a/21706087
+-dontwarn org.xmlpull.v1.**
+
+# StrongHttpsClient and its support classes are totally unused, so the
+# ch.boye.httpclientandroidlib.** classes are also unneeded
+-dontwarn info.guardianproject.netcipher.client.**
+
+# These libraries are known to break if minification is enabled on them. They
+# use reflection to instantiate classes, for example. If the keep flags are
+# removed, proguard will strip classes which are required, which may result in
+# crashes.
+-keep class kellinwood.security.zipsigner.** {*;}
+-keep class org.bouncycastle.** {*;}
+
+# This keeps class members used for SystemInstaller IPC.
+#   Reference: https://gitlab.com/fdroid/fdroidclient/issues/79
+-keepclassmembers class * implements android.os.IInterface {
+    public *;
+}
+
+-keepattributes *Annotation*,EnclosingMethod,Signature
+-keepnames class com.fasterxml.jackson.** { *; }
+-dontwarn com.fasterxml.jackson.databind.ext.**
+-keep class org.codehaus.** { *; }
+-keepclassmembers public final enum org.codehaus.jackson.annotate.JsonAutoDetect$Visibility {
+public static final org.codehaus.jackson.annotate.JsonAutoDetect$Visibility *; }
+-keep public class your.class.** {
+  *;
+}
+
+# This is necessary so that RemoteWorkManager can be initialized (also marked with @Keep)
+-keep class androidx.work.multiprocess.RemoteWorkManagerClient {
+    public <init>(...);
+}

app/src/androidTest/AndroidManifest.xml

@@ -0,0 +1,24 @@
+<?xml version="1.0" encoding="utf-8"?>
+
+<!-- package name must be unique so suffix with "tests" so package loader doesn't ignore us -->
+<manifest xmlns:android="http://schemas.android.com/apk/res/android"
+    xmlns:tools="http://schemas.android.com/tools"
+    package="org.fdroid.fdroid.tests"
+    android:versionCode="1"
+    android:versionName="1.0">
+
+    <uses-sdk tools:overrideLibrary="android_libs.ub_uiautomator" />
+
+    <!-- We add an application tag here just so that we can indicate that
+         this package needs to link against the android.test library,
+         which is needed when building test cases. -->
+    <application>
+        <uses-library
+            android:name="android.test.runner"
+            android:required="false" />
+    </application>
+
+    <uses-permission android:name="android.permission.READ_EXTERNAL_STORAGE" />
+    <uses-permission android:name="android.permission.WRITE_EXTERNAL_STORAGE" />
+
+</manifest>

app/src/androidTest/assets/extendedPerms.xml

@@ -0,0 +1,125 @@
+<?xml version="1.0" encoding="utf-8"?>
+<fdroid>
+    <repo name="F-Droid" icon="fdroid-icon.png" maxage="14"
+        pubkey="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"
+        timestamp="1467169032" url="http://f-droid.org/repo" version="16">
+        <description>
+            This is just a test of the extended permissions attributes.
+        </description>
+    </repo>
+
+    <application id="urzip.at.or.at.urzip">
+        <id>at.bitfire.davdroid</id>
+        <added>2013-10-13</added>
+        <lastupdated>2016-06-26</lastupdated>
+        <name>DAVdroid</name>
+        <summary>Contacts and Calendar sync</summary>
+        <icon>at.bitfire.davdroid.107.png</icon>
+        <desc>apk generated from urzip to test extended permissions</desc>
+        <license>GPLv3</license>
+        <categories>Internet</categories>
+        <category>Internet</category>
+        <web>https://davdroid.bitfire.at/</web>
+        <source>https://davdroid.bitfire.at/source/</source>
+        <tracker>https://davdroid.bitfire.at/forums/</tracker>
+        <changelog>https://gitlab.com/bitfireAT/davdroid/tags</changelog>
+        <donate>https://davdroid.bitfire.at/donate/</donate>
+        <bitcoin>1KSCy7RHztKuhW9fLLaUYqdwdC2iwbejZU</bitcoin>
+        <flattr>2100160</flattr>
+        <marketversion>1.1.1.2</marketversion>
+        <marketvercode>107</marketvercode>
+        <package>
+            <version>1.3.2-FAKE</version>
+            <versioncode>117</versioncode>
+            <apkname>org.fdroid.extendedpermissionstest.apk</apkname>
+            <srcname>at.bitfire.davdroid_116_src.tar.gz</srcname>
+            <hash type="sha256">f1aa02257e99c167d2ea9b0e9525c3ce7c181fe2e7f4dd00b65dd81ed2e27a62
+            </hash>
+            <sig>03542175324d067b4c36582242f8aecc</sig>
+            <size>3298864</size>
+            <sdkver>14</sdkver>
+            <targetSdkVersion>23</targetSdkVersion>
+            <added>2016-09-22</added>
+            <permissions>
+                READ_EXTERNAL_STORAGE,WRITE_SYNC_SETTINGS,ACCESS_NETWORK_STATE,WRITE_EXTERNAL_STORAGE,WRITE_CONTACTS,ACCESS_WIFI_STATE,REQUEST_IGNORE_BATTERY_OPTIMIZATIONS,WRITE_CALENDAR,READ_CONTACTS,READ_SYNC_SETTINGS,MANAGE_ACCOUNTS,INTERNET,AUTHENTICATE_ACCOUNTS,GET_ACCOUNTS,READ_CALENDAR,READ_SYNC_STATS
+            </permissions>
+            <uses-permission name="android.permission.GET_ACCOUNTS" maxSdkVersion="22" />
+            <uses-permission name="android.permission.READ_EXTERNAL_STORAGE" maxSdkVersion="18" />
+            <uses-permission name="android.permission.WRITE_EXTERNAL_STORAGE" maxSdkVersion="18" />
+            <uses-permission name="android.permission.AUTHENTICATE_ACCOUNTS" maxSdkVersion="22" />
+            <uses-permission name="android.permission.MANAGE_ACCOUNTS" maxSdkVersion="22" />
+            <uses-permission-sdk-23 name="android.permission.CAMERA" />
+            <uses-permission-sdk-23 name="android.permission.CALL_PHONE" maxSdkVersion="23" />
+        </package>
+        <package>
+            <version>1.3.1-ose</version>
+            <versioncode>116</versioncode>
+            <apkname>at.bitfire.davdroid_116.apk</apkname>
+            <srcname>at.bitfire.davdroid_116_src.tar.gz</srcname>
+            <hash type="sha256">f1aa02257e99c167d2ea9b0e9525c3ce7c181fe2e7f4dd00b65dd81ed2e27a62
+            </hash>
+            <sig>03542175324d067b4c36582242f8aecc</sig>
+            <size>3298864</size>
+            <sdkver>14</sdkver>
+            <targetSdkVersion>24</targetSdkVersion>
+            <added>2016-09-21</added>
+            <permissions>
+                READ_EXTERNAL_STORAGE,WRITE_SYNC_SETTINGS,ACCESS_NETWORK_STATE,WRITE_EXTERNAL_STORAGE,org.dmfs.permission.READ_TASKS,WRITE_CONTACTS,ACCESS_WIFI_STATE,REQUEST_IGNORE_BATTERY_OPTIMIZATIONS,WRITE_CALENDAR,READ_CONTACTS,READ_SYNC_SETTINGS,MANAGE_ACCOUNTS,INTERNET,AUTHENTICATE_ACCOUNTS,GET_ACCOUNTS,READ_CALENDAR,org.dmfs.permission.WRITE_TASKS
+            </permissions>
+            <uses-permission name="android.permission.GET_ACCOUNTS" maxSdkVersion="22" />
+            <uses-permission name="android.permission.READ_EXTERNAL_STORAGE" maxSdkVersion="18" />
+            <uses-permission name="android.permission.WRITE_EXTERNAL_STORAGE" />
+            <uses-permission name="android.permission.AUTHENTICATE_ACCOUNTS" maxSdkVersion="22" />
+            <uses-permission name="android.permission.MANAGE_ACCOUNTS" maxSdkVersion="22" />
+        </package>
+        <package>
+            <version>1.1.1.2</version>
+            <versioncode>107</versioncode>
+            <apkname>at.bitfire.davdroid_107.apk</apkname>
+            <srcname>at.bitfire.davdroid_107_src.tar.gz</srcname>
+            <hash type="sha256">9a616f2e97bf8cf012baf896f95667dea4e3ce3252b31c5715073638a9fcc3d4
+            </hash>
+            <sig>03542175324d067b4c36582242f8aecc</sig>
+            <size>3134363</size>
+            <sdkver>14</sdkver>
+            <targetSdkVersion>23</targetSdkVersion>
+            <added>2016-06-26</added>
+            <permissions>
+                org.dmfs.permission.READ_TASKS,WRITE_CONTACTS,GET_ACCOUNTS,AUTHENTICATE_ACCOUNTS,WRITE_EXTERNAL_STORAGE,READ_CALENDAR,ACCESS_WIFI_STATE,org.dmfs.permission.WRITE_TASKS,ACCESS_NETWORK_STATE,WRITE_CALENDAR,READ_CONTACTS,READ_SYNC_SETTINGS,INTERNET,MANAGE_ACCOUNTS,WRITE_SYNC_SETTINGS
+            </permissions>
+        </package>
+        <package>
+            <version>1.1.1.1</version>
+            <versioncode>105</versioncode>
+            <apkname>at.bitfire.davdroid_105.apk</apkname>
+            <srcname>at.bitfire.davdroid_105_src.tar.gz</srcname>
+            <hash type="sha256">4a0408c61536a1cc1028cea4273adbde2e57dfa2b12d93c3b52f4c3d095e2849
+            </hash>
+            <sig>03542175324d067b4c36582242f8aecc</sig>
+            <size>3131567</size>
+            <sdkver>14</sdkver>
+            <targetSdkVersion>23</targetSdkVersion>
+            <added>2016-06-24</added>
+            <permissions>
+                org.dmfs.permission.READ_TASKS,READ_EXTERNAL_STORAGE,WRITE_CONTACTS,GET_ACCOUNTS,AUTHENTICATE_ACCOUNTS,WRITE_EXTERNAL_STORAGE,READ_CALENDAR,ACCESS_WIFI_STATE,org.dmfs.permission.WRITE_TASKS,ACCESS_NETWORK_STATE,WRITE_CALENDAR,READ_CONTACTS,READ_SYNC_SETTINGS,INTERNET,MANAGE_ACCOUNTS,WRITE_SYNC_SETTINGS
+            </permissions>
+        </package>
+        <package>
+            <version>1.1.1</version>
+            <versioncode>104</versioncode>
+            <apkname>at.bitfire.davdroid_104.apk</apkname>
+            <srcname>at.bitfire.davdroid_104_src.tar.gz</srcname>
+            <hash type="sha256">09ba34996177efe8b1498a93fe6521ab84efab3bccb0f42449116e80b59e5b56
+            </hash>
+            <sig>03542175324d067b4c36582242f8aecc</sig>
+            <size>3131367</size>
+            <sdkver>14</sdkver>
+            <targetSdkVersion>23</targetSdkVersion>
+            <added>2016-06-22</added>
+            <permissions>
+                org.dmfs.permission.READ_TASKS,READ_EXTERNAL_STORAGE,WRITE_CONTACTS,GET_ACCOUNTS,AUTHENTICATE_ACCOUNTS,WRITE_EXTERNAL_STORAGE,READ_CALENDAR,ACCESS_WIFI_STATE,org.dmfs.permission.WRITE_TASKS,ACCESS_NETWORK_STATE,WRITE_CALENDAR,READ_CONTACTS,READ_SYNC_SETTINGS,INTERNET,MANAGE_ACCOUNTS,WRITE_SYNC_SETTINGS
+            </permissions>
+        </package>
+    </application>
+
+</fdroid>

app/src/androidTest/java/org/fdroid/fdroid/AssetUtils.java

@@ -0,0 +1,43 @@
+package org.fdroid.fdroid;
+
+import android.content.Context;
+import android.util.Log;
+import androidx.annotation.Nullable;
+
+import java.io.File;
+import java.io.FileOutputStream;
+import java.io.IOException;
+import java.io.InputStream;
+import java.io.OutputStream;
+
+import static org.junit.Assert.fail;
+
+public class AssetUtils {
+
+    private static final String TAG = "Utils";
+
+    /**
+     * This requires {@link Context} from {@link android.app.Instrumentation#getContext()}
+     */
+    @Nullable
+    public static File copyAssetToDir(Context context, String assetName, File directory) {
+        File tempFile = null;
+        InputStream input = null;
+        OutputStream output = null;
+        try {
+            tempFile = File.createTempFile(assetName, ".testasset", directory);
+            Log.i(TAG, "Copying asset file " + assetName + " to directory " + directory);
+            input = context.getAssets().open(assetName);
+            output = new FileOutputStream(tempFile);
+            Utils.copy(input, output);
+        } catch (IOException e) {
+            Log.e(TAG, "Check the context is from Instrumentation.getContext()");
+            fail(e.getMessage());
+        } finally {
+            Utils.closeQuietly(output);
+            Utils.closeQuietly(input);
+        }
+        return tempFile;
+    }
+
+}

app/src/androidTest/java/org/fdroid/fdroid/LocalizationTest.java

@@ -0,0 +1,222 @@
+package org.fdroid.fdroid;
+
+import android.app.Instrumentation;
+import android.content.Context;
+import android.content.res.AssetManager;
+import android.content.res.Configuration;
+import android.content.res.Resources;
+import androidx.test.platform.app.InstrumentationRegistry;
+import androidx.test.ext.junit.runners.AndroidJUnit4;
+import android.text.TextUtils;
+import android.util.DisplayMetrics;
+import android.util.Log;
+import org.junit.Before;
+import org.junit.Test;
+import org.junit.runner.RunWith;
+
+import java.lang.reflect.Field;
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.IllegalFormatException;
+import java.util.Locale;
+import java.util.regex.Matcher;
+import java.util.regex.Pattern;
+
+/**
+ * Runs through all of the translated strings and tests them with the same format
+ * values that the source strings expect.  This is to ensure that the formats in
+ * the translations are correct in number and in type (e.g. {@code s} or {@code s}.
+ * It reads the source formats and then builds {@code formats} to represent the
+ * position and type of the formats.  Then it runs through all of the translations
+ * with formats of the correct number and type.
+ */
+@RunWith(AndroidJUnit4.class)
+public class LocalizationTest {
+    public static final String TAG = "LocalizationTest";
+
+    private final Pattern androidFormat = Pattern.compile("(%[a-z0-9]\\$?[a-z]?)");
+    private final Locale[] locales = Locale.getAvailableLocales();
+    private final HashSet<String> localeNames = new HashSet<>(locales.length);
+
+    private AssetManager assets;
+    private Configuration config;
+    private Resources resources;
+
+    @Before
+    public void setUp() {
+        for (Locale locale : Languages.LOCALES_TO_TEST) {
+            localeNames.add(locale.toString());
+        }
+        for (Locale locale : locales) {
+            localeNames.add(locale.toString());
+        }
+
+        Instrumentation instrumentation = InstrumentationRegistry.getInstrumentation();
+        Context context = instrumentation.getTargetContext();
+        assets = context.getAssets();
+        config = context.getResources().getConfiguration();
+        config.locale = Locale.ENGLISH;
+        // Resources() requires DisplayMetrics, but they are only needed for drawables
+        resources = new Resources(assets, new DisplayMetrics(), config);
+    }
+
+    @Test
+    public void testLoadAllPlural() throws IllegalAccessException {
+        Field[] fields = R.plurals.class.getDeclaredFields();
+
+        HashMap<String, String> haveFormats = new HashMap<>();
+        for (Field field : fields) {
+            //Log.i(TAG, field.getName());
+            int resId = field.getInt(int.class);
+            CharSequence string = resources.getQuantityText(resId, 4);
+            //Log.i(TAG, field.getName() + ": '" + string + "'");
+            Matcher matcher = androidFormat.matcher(string);
+            int matches = 0;
+            char[] formats = new char[5];
+            while (matcher.find()) {
+                String match = matcher.group(0);
+                char formatType = match.charAt(match.length() - 1);
+                switch (match.length()) {
+                    case 2:
+                        formats[matches] = formatType;
+                        matches++;
+                        break;
+                    case 4:
+                        formats[Integer.parseInt(match.substring(1, 2)) - 1] = formatType;
+                        break;
+                    case 5:
+                        formats[Integer.parseInt(match.substring(1, 3)) - 1] = formatType;
+                        break;
+                    default:
+                        throw new IllegalStateException(field.getName() + " has bad format: " + match);
+                }
+            }
+            haveFormats.put(field.getName(), new String(formats).trim());
+        }
+
+        for (Locale locale : locales) {
+            config.locale = locale;
+            // Resources() requires DisplayMetrics, but they are only needed for drawables
+            resources = new Resources(assets, new DisplayMetrics(), config);
+            for (Field field : fields) {
+                String formats = null;
+                try {
+                    int resId = field.getInt(int.class);
+                    for (int quantity = 0; quantity < 567; quantity++) {
+                        resources.getQuantityString(resId, quantity);
+                    }
+
+                    formats = haveFormats.get(field.getName());
+                    switch (formats) {
+                        case "d":
+                            resources.getQuantityString(resId, 1, 1);
+                            break;
+                        case "s":
+                            resources.getQuantityString(resId, 1, "ONE");
+                            break;
+                        case "ds":
+                            resources.getQuantityString(resId, 2, 1, "TWO");
+                            break;
+                        default:
+                            if (!TextUtils.isEmpty(formats)) {
+                                throw new IllegalStateException("Pattern not included in tests: " + formats);
+                            }
+                    }
+                } catch (IllegalFormatException | Resources.NotFoundException e) {
+                    Log.i(TAG, locale + " " + field.getName());
+                    throw new IllegalArgumentException("Bad '" + formats + "' format in " + locale + " "
+                            + field.getName() + ": " + e.getMessage());
+                }
+            }
+        }
+    }
+
+    @Test
+    public void testLoadAllStrings() throws IllegalAccessException {
+        Field[] fields = R.string.class.getDeclaredFields();
+
+        HashMap<String, String> haveFormats = new HashMap<>();
+        for (Field field : fields) {
+            String string = resources.getString(field.getInt(int.class));
+            Matcher matcher = androidFormat.matcher(string);
+            int matches = 0;
+            char[] formats = new char[5];
+            while (matcher.find()) {
+                String match = matcher.group(0);
+                char formatType = match.charAt(match.length() - 1);
+                switch (match.length()) {
+                    case 2:
+                        formats[matches] = formatType;
+                        matches++;
+                        break;
+                    case 4:
+                        formats[Integer.parseInt(match.substring(1, 2)) - 1] = formatType;
+                        break;
+                    case 5:
+                        formats[Integer.parseInt(match.substring(1, 3)) - 1] = formatType;
+                        break;
+                    default:
+                        throw new IllegalStateException(field.getName() + " has bad format: " + match);
+                }
+            }
+            haveFormats.put(field.getName(), new String(formats).trim());
+        }
+
+        for (Locale locale : locales) {
+            config.locale = locale;
+            // Resources() requires DisplayMetrics, but they are only needed for drawables
+            resources = new Resources(assets, new DisplayMetrics(), config);
+            for (Field field : fields) {
+                int resId = field.getInt(int.class);
+                resources.getString(resId);
+
+                String formats = haveFormats.get(field.getName());
+                try {
+                    switch (formats) {
+                        case "d":
+                            resources.getString(resId, 1);
+                            break;
+                        case "dd":
+                            resources.getString(resId, 1, 2);
+                            break;
+                        case "ds":
+                            resources.getString(resId, 1, "TWO");
+                            break;
+                        case "dds":
+                            resources.getString(resId, 1, 2, "THREE");
+                            break;
+                        case "sds":
+                            resources.getString(resId, "ONE", 2, "THREE");
+                            break;
+                        case "s":
+                            resources.getString(resId, "ONE");
+                            break;
+                        case "ss":
+                            resources.getString(resId, "ONE", "TWO");
+                            break;
+                        case "sss":
+                            resources.getString(resId, "ONE", "TWO", "THREE");
+                            break;
+                        case "ssss":
+                            resources.getString(resId, "ONE", "TWO", "THREE", "FOUR");
+                            break;
+                        case "ssd":
+                            resources.getString(resId, "ONE", "TWO", 3);
+                            break;
+                        case "sssd":
+                            resources.getString(resId, "ONE", "TWO", "THREE", 4);
+                            break;
+                        default:
+                            if (!TextUtils.isEmpty(formats)) {
+                                throw new IllegalStateException("Pattern not included in tests: " + formats);
+                            }
+                    }
+                } catch (Exception e) {
+                    Log.i(TAG, locale + " " + field.getName());
+                    throw new IllegalArgumentException("Bad format in '" + locale + "' '" + field.getName() + "': "
+                            + e.getMessage());
+                }
+            }
+        }
+    }
+}

app/src/androidTest/java/org/fdroid/fdroid/MainActivityEspressoTest.java

@@ -0,0 +1,303 @@
+package org.fdroid.fdroid;
+
+import android.Manifest;
+import android.app.ActivityManager;
+import android.app.Instrumentation;
+import android.content.Context;
+import android.os.Build;
+
+import androidx.core.content.ContextCompat;
+import androidx.test.core.app.ApplicationProvider;
+import androidx.test.filters.LargeTest;
+import androidx.test.platform.app.InstrumentationRegistry;
+import androidx.test.espresso.IdlingPolicies;
+import androidx.test.espresso.ViewInteraction;
+import androidx.test.rule.ActivityTestRule;
+import androidx.test.rule.GrantPermissionRule;
+import androidx.test.ext.junit.runners.AndroidJUnit4;
+import androidx.test.uiautomator.UiDevice;
+import androidx.test.uiautomator.UiObject;
+import androidx.test.uiautomator.UiObjectNotFoundException;
+import androidx.test.uiautomator.UiSelector;
+import android.util.Log;
+import android.view.View;
+import org.fdroid.fdroid.views.StatusBanner;
+import org.fdroid.fdroid.views.main.MainActivity;
+import org.hamcrest.Matchers;
+import org.junit.After;
+import org.junit.AfterClass;
+import org.junit.Before;
+import org.junit.BeforeClass;
+import org.junit.Rule;
+import org.junit.Test;
+import org.junit.runner.RunWith;
+
+import java.io.IOException;
+import java.util.concurrent.TimeUnit;
+
+import static androidx.test.espresso.Espresso.onView;
+import static androidx.test.espresso.action.ViewActions.click;
+import static androidx.test.espresso.action.ViewActions.swipeDown;
+import static androidx.test.espresso.action.ViewActions.swipeLeft;
+import static androidx.test.espresso.action.ViewActions.swipeRight;
+import static androidx.test.espresso.action.ViewActions.swipeUp;
+import static androidx.test.espresso.action.ViewActions.typeText;
+import static androidx.test.espresso.assertion.ViewAssertions.doesNotExist;
+import static androidx.test.espresso.assertion.ViewAssertions.matches;
+import static androidx.test.espresso.matcher.ViewMatchers.isDisplayed;
+import static androidx.test.espresso.matcher.ViewMatchers.withContentDescription;
+import static androidx.test.espresso.matcher.ViewMatchers.withId;
+import static androidx.test.espresso.matcher.ViewMatchers.withText;
+import static org.hamcrest.Matchers.allOf;
+import static org.hamcrest.Matchers.not;
+import static org.junit.Assert.assertTrue;
+import static org.junit.Assume.assumeTrue;
+
+@LargeTest
+@RunWith(AndroidJUnit4.class)
+public class MainActivityEspressoTest {
+    public static final String TAG = "MainActivityEspressoTest";
+
+    /**
+     * Emulators older than {@code android-25} seem to fail at running Espresso tests.
+     * <p>
+     * ARM emulators are too slow to run these tests in a useful way.  The sad
+     * thing is that it would probably work if Android didn't put up the ANR
+     * "Process system isn't responding" on boot each time.  There seems to be no
+     * way to increase the ANR timeout.
+     */
+    private static boolean canRunEspresso() {
+        if (Build.VERSION.SDK_INT < 25
+                || (Build.SUPPORTED_ABIS[0].startsWith("arm") && isEmulator())) {
+            Log.e(TAG, "SKIPPING TEST: ARM emulators are too slow to run these tests in a useful way");
+            return false;
+        }
+        return true;
+    }
+
+    @BeforeClass
+    public static void classSetUp() {
+        IdlingPolicies.setIdlingResourceTimeout(10, TimeUnit.MINUTES);
+        IdlingPolicies.setMasterPolicyTimeout(10, TimeUnit.MINUTES);
+        if (!canRunEspresso()) {
+            return;
+        }
+        Instrumentation instrumentation = InstrumentationRegistry.getInstrumentation();
+        try {
+            UiDevice.getInstance(instrumentation)
+                    .executeShellCommand("pm grant "
+                            + instrumentation.getTargetContext().getPackageName()
+                            + " android.permission.SET_ANIMATION_SCALE");
+        } catch (IOException e) {
+            e.printStackTrace();
+        }
+        SystemAnimations.disableAll(ApplicationProvider.getApplicationContext());
+
+        // dismiss the ANR or any other system dialogs that might be there
+        UiObject button = new UiObject(new UiSelector().text("Wait").enabled(true));
+        try {
+            button.click();
+        } catch (UiObjectNotFoundException e) {
+            Log.d(TAG, e.getLocalizedMessage());
+        }
+        new UiWatchers().registerAnrAndCrashWatchers();
+
+        Context context = instrumentation.getTargetContext();
+        ActivityManager.MemoryInfo mi = new ActivityManager.MemoryInfo();
+        ActivityManager activityManager = ContextCompat.getSystemService(context, ActivityManager.class);
+        activityManager.getMemoryInfo(mi);
+        long percentAvail = mi.availMem / mi.totalMem;
+        Log.i(TAG, "RAM: " + mi.availMem + " / " + mi.totalMem + " = " + percentAvail);
+    }
+
+    @AfterClass
+    public static void classTearDown() {
+        SystemAnimations.enableAll(ApplicationProvider.getApplicationContext());
+    }
+
+    public static boolean isEmulator() {
+        return Build.FINGERPRINT.startsWith("generic")
+                || Build.FINGERPRINT.startsWith("unknown")
+                || Build.MODEL.contains("google_sdk")
+                || Build.MODEL.contains("Emulator")
+                || Build.MODEL.contains("Android SDK built for x86")
+                || Build.MANUFACTURER.contains("Genymotion")
+                || (Build.BRAND.startsWith("generic") && Build.DEVICE.startsWith("generic"))
+                || "google_sdk".equals(Build.PRODUCT);
+    }
+
+    @Before
+    public void setUp() {
+        assumeTrue(canRunEspresso());
+    }
+
+    /**
+     * Placate {@link android.os.StrictMode}
+     *
+     * @see <a href="https://github.com/aosp-mirror/platform_frameworks_base/commit/6f3a38f3afd79ed6dddcef5c83cb442d6749e2ff"> Run finalizers before counting for StrictMode</a>
+     */
+    @After
+    public void tearDown() {
+        System.gc();
+        System.runFinalization();
+        System.gc();
+    }
+
+    @Rule
+    public ActivityTestRule<MainActivity> activityTestRule =
+            new ActivityTestRule<>(MainActivity.class);
+
+    @Rule
+    public GrantPermissionRule accessCoarseLocationPermissionRule = GrantPermissionRule.grant(
+            Manifest.permission.ACCESS_COARSE_LOCATION);
+
+    @Rule
+    public GrantPermissionRule writeExternalStoragePermissionRule = GrantPermissionRule.grant(
+            Manifest.permission.WRITE_EXTERNAL_STORAGE);
+
+    @Test
+    public void bottomNavFlavorCheck() {
+        onView(withText(R.string.main_menu__updates)).check(matches(isDisplayed()));
+        onView(withText(R.string.menu_settings)).check(matches(isDisplayed()));
+        onView(withText("THIS SHOULD NOT SHOW UP ANYWHERE!!!")).check(doesNotExist());
+
+        assertTrue(BuildConfig.FLAVOR.startsWith("full") || BuildConfig.FLAVOR.startsWith("basic"));
+
+        if (BuildConfig.FLAVOR.startsWith("basic")) {
+            onView(withText(R.string.main_menu__latest_apps)).check(matches(isDisplayed()));
+            onView(withText(R.string.main_menu__categories)).check(doesNotExist());
+            onView(withText(R.string.main_menu__swap_nearby)).check(doesNotExist());
+        }
+
+        if (BuildConfig.FLAVOR.startsWith("full")) {
+            onView(withText(R.string.main_menu__latest_apps)).check(matches(isDisplayed()));
+            onView(withText(R.string.main_menu__categories)).check(matches(isDisplayed()));
+            onView(withText(R.string.main_menu__swap_nearby)).check(matches(isDisplayed()));
+        }
+    }
+
+    @LargeTest
+    @Test
+    public void showSettings() {
+        ViewInteraction settingsBottonNavButton = onView(
+                allOf(withText(R.string.menu_settings), isDisplayed()));
+        settingsBottonNavButton.perform(click());
+        onView(withText(R.string.preference_manage_installed_apps)).check(matches(isDisplayed()));
+        if (BuildConfig.FLAVOR.startsWith("basic") && BuildConfig.APPLICATION_ID.endsWith(".debug")) {
+            // TODO fix me by sorting out the flavor applicationId for debug builds in app/build.gradle
+            Log.i(TAG, "Skipping the remainder of showSettings test because it just crashes on basic .debug builds");
+            return;
+        }
+        ViewInteraction manageInstalledAppsButton = onView(
+                allOf(withText(R.string.preference_manage_installed_apps), isDisplayed()));
+        manageInstalledAppsButton.perform(click());
+        onView(withText(R.string.installed_apps__activity_title)).check(matches(isDisplayed()));
+        onView(withContentDescription(R.string.abc_action_bar_up_description)).perform(click());
+
+        onView(withText(R.string.menu_manage)).perform(click());
+        onView(withContentDescription(R.string.abc_action_bar_up_description)).perform(click());
+
+        manageInstalledAppsButton.perform(click());
+        onView(withText(R.string.installed_apps__activity_title)).check(matches(isDisplayed()));
+        onView(withContentDescription(R.string.abc_action_bar_up_description)).perform(click());
+
+        onView(withText(R.string.menu_manage)).perform(click());
+        onView(withContentDescription(R.string.abc_action_bar_up_description)).perform(click());
+
+        onView(withText(R.string.about_title)).perform(click());
+        onView(withId(R.id.version)).check(matches(isDisplayed()));
+        onView(withId(R.id.ok_button)).perform(click());
+
+        onView(withId(android.R.id.list_container)).perform(swipeUp()).perform(swipeUp()).perform(swipeUp());
+    }
+
+    @LargeTest
+    @Test
+    public void showUpdates() {
+        ViewInteraction updatesBottonNavButton = onView(allOf(withText(R.string.main_menu__updates), isDisplayed()));
+        updatesBottonNavButton.perform(click());
+        onView(withText(R.string.main_menu__updates)).check(matches(isDisplayed()));
+    }
+
+    @LargeTest
+    @Test
+    public void startSwap() {
+        if (!BuildConfig.FLAVOR.startsWith("full")) {
+            return;
+        }
+        ViewInteraction nearbyBottonNavButton = onView(
+                allOf(withText(R.string.main_menu__swap_nearby), isDisplayed()));
+        nearbyBottonNavButton.perform(click());
+        ViewInteraction findPeopleButton = onView(
+                allOf(withId(R.id.find_people_button), withText(R.string.nearby_splash__find_people_button),
+                        isDisplayed()));
+        findPeopleButton.perform(click());
+        onView(withText(R.string.swap_send_fdroid)).check(matches(isDisplayed()));
+    }
+
+    @LargeTest
+    @Test
+    public void showCategories() {
+        if (!BuildConfig.FLAVOR.startsWith("full")) {
+            return;
+        }
+        onView(allOf(withText(R.string.menu_settings), isDisplayed())).perform(click());
+        onView(allOf(withText(R.string.main_menu__categories), isDisplayed())).perform(click());
+        onView(allOf(withId(R.id.swipe_to_refresh), isDisplayed()))
+                .perform(swipeDown())
+                .perform(swipeUp())
+                .perform(swipeUp())
+                .perform(swipeUp())
+                .perform(swipeUp())
+                .perform(swipeUp())
+                .perform(swipeUp())
+                .perform(swipeDown())
+                .perform(swipeDown())
+                .perform(swipeRight())
+                .perform(swipeLeft())
+                .perform(swipeLeft())
+                .perform(swipeLeft())
+                .perform(swipeLeft())
+                .perform(click());
+    }
+
+    @LargeTest
+    @Test
+    public void showLatest() {
+        if (!BuildConfig.FLAVOR.startsWith("full")) {
+            return;
+        }
+        onView(Matchers.<View>instanceOf(StatusBanner.class)).check(matches(not(isDisplayed())));
+        onView(allOf(withText(R.string.menu_settings), isDisplayed())).perform(click());
+        onView(allOf(withText(R.string.main_menu__latest_apps), isDisplayed())).perform(click());
+        onView(allOf(withId(R.id.swipe_to_refresh), isDisplayed()))
+                .perform(swipeDown())
+                .perform(swipeUp())
+                .perform(swipeUp())
+                .perform(swipeUp())
+                .perform(swipeDown())
+                .perform(swipeUp())
+                .perform(swipeDown())
+                .perform(swipeDown())
+                .perform(swipeDown())
+                .perform(swipeDown())
+                .perform(click());
+    }
+
+    @LargeTest
+    @Test
+    public void showSearch() {
+        onView(allOf(withText(R.string.menu_settings), isDisplayed())).perform(click());
+        onView(withId(R.id.fab_search)).check(doesNotExist());
+        if (!BuildConfig.FLAVOR.startsWith("full")) {
+            return;
+        }
+        onView(allOf(withText(R.string.main_menu__latest_apps), isDisplayed())).perform(click());
+        onView(allOf(withId(R.id.fab_search), isDisplayed())).perform(click());
+        onView(withId(R.id.sort)).check(matches(isDisplayed()));
+        onView(allOf(withId(R.id.search), isDisplayed()))
+                .perform(click())
+                .perform(typeText("test"));
+        onView(allOf(withId(R.id.sort), isDisplayed())).perform(click());
+    }
+}

app/src/androidTest/java/org/fdroid/fdroid/Netstat.java

@@ -0,0 +1,372 @@
+package org.fdroid.fdroid;
+
+import java.io.BufferedReader;
+import java.io.FileReader;
+import java.util.ArrayList;
+import java.util.List;
+import java.util.regex.Matcher;
+import java.util.regex.Pattern;
+
+/**
+ * Replacer for the netstat utility, by reading the /proc filesystem it can find out the
+ * open connections of the system
+ * From http://www.ussg.iu.edu/hypermail/linux/kernel/0409.1/2166.html :
+ * It will first list all listening TCP sockets, and next list all established
+ * TCP connections. A typical entry of /proc/net/tcp would look like this (split
+ * up into 3 parts because of the length of the line):
+ * <p>
+ * 46: 010310AC:9C4C 030310AC:1770 01
+ * | | | | | |--> connection state
+ * | | | | |------> remote TCP port number
+ * | | | |-------------> remote IPv4 address
+ * | | |--------------------> local TCP port number
+ * | |---------------------------> local IPv4 address
+ * |----------------------------------> number of entry
+ * <p>
+ * 00000150:00000000 01:00000019 00000000
+ * | | | | |--> number of unrecovered RTO timeouts
+ * | | | |----------> number of jiffies until timer expires
+ * | | |----------------> timer_active (see below)
+ * | |----------------------> receive-queue
+ * |-------------------------------> transmit-queue
+ * <p>
+ * 1000 0 54165785 4 cd1e6040 25 4 27 3 -1
+ * | | | | | | | | | |--> slow start size threshold,
+ * | | | | | | | | | or -1 if the treshold
+ * | | | | | | | | | is >= 0xFFFF
+ * | | | | | | | | |----> sending congestion window
+ * | | | | | | | |-------> (ack.quick<<1)|ack.pingpong
+ * | | | | | | |---------> Predicted tick of soft clock
+ * | | | | | | (delayed ACK control data)
+ * | | | | | |------------> retransmit timeout
+ * | | | | |------------------> location of socket in memory
+ * | | | |-----------------------> socket reference count
+ * | | |-----------------------------> inode
+ * | |----------------------------------> unanswered 0-window probes
+ * |---------------------------------------------> uid
+ *
+ * @author Ciprian Dobre
+ */
+public class Netstat {
+
+    /**
+     * Possible values for states in /proc/net/tcp
+     */
+    private static final String[] STATES = {
+            "ESTBLSH", "SYNSENT", "SYNRECV", "FWAIT1", "FWAIT2", "TMEWAIT",
+            "CLOSED", "CLSWAIT", "LASTACK", "LISTEN", "CLOSING", "UNKNOWN",
+    };
+    /**
+     * Pattern used when parsing through /proc/net/tcp
+     */
+    private static final Pattern NET_PATTERN = Pattern.compile(
+            "\\d+:\\s+([\\dA-F]+):([\\dA-F]+)\\s+([\\dA-F]+):([\\dA-F]+)\\s+([\\dA-F]+)\\s+" +
+                    "[\\dA-F]+:[\\dA-F]+\\s+[\\dA-F]+:[\\dA-F]+\\s+[\\dA-F]+\\s+([\\d]+)\\s+[\\d]+\\s+([\\d]+)");
+
+    /**
+     * Utility method that converts an address from a hex representation as founded in /proc to String representation
+     */
+    private static String getAddress(final String hexa) {
+        try {
+            // first let's convert the address to Integer
+            final long v = Long.parseLong(hexa, 16);
+            // in /proc the order is little endian and java uses big endian order we also need to invert the order
+            final long adr = (v >>> 24) | (v << 24) |
+                    ((v << 8) & 0x00FF0000) | ((v >> 8) & 0x0000FF00);
+            // and now it's time to output the result
+            return ((adr >> 24) & 0xff) + "." + ((adr >> 16) & 0xff) + "." + ((adr >> 8) & 0xff) + "." + (adr & 0xff);
+        } catch (Exception ex) {
+            ex.printStackTrace();
+            return "0.0.0.0";  // NOPMD
+        }
+    }
+
+    private static int getInt16(final String hexa) {
+        try {
+            return Integer.parseInt(hexa, 16);
+        } catch (Exception ex) {
+            ex.printStackTrace();
+            return -1;
+        }
+    }
+
+    /*
+    private static String getPName(final int pid) {
+        final Pattern pattern = Pattern.compile("Name:\\s*(\\S+)");
+        try {
+            BufferedReader in = new BufferedReader(new FileReader("/proc/" + pid + "/status"));
+            String line;
+            while ((line = in.readLine()) != null) {
+                final Matcher matcher = pattern.matcher(line);
+                if (matcher.find()) {
+                    return matcher.group(1);
+                }
+            }
+            in.close();
+        } catch (Throwable t) {
+            // ignored
+        }
+        return "UNKNOWN";
+    }
+    */
+
+    /**
+     * Method used to question for the connections currently openned
+     *
+     * @return The list of connections (as Connection objects)
+     */
+    public static List<Connection> getConnections() {
+
+        final ArrayList<Connection> net = new ArrayList<>();
+
+        // read from /proc/net/tcp the list of currently openned socket connections
+        try {
+            BufferedReader in = new BufferedReader(new FileReader("/proc/net/tcp"));
+            String line;
+            while ((line = in.readLine()) != null) { // NOPMD
+                Matcher matcher = NET_PATTERN.matcher(line);
+                if (matcher.find()) {
+                    final Connection c = new Connection();
+                    c.setProtocol(Connection.TCP_CONNECTION);
+                    net.add(c);
+                    final String localPortHexa = matcher.group(2);
+                    final String remoteAddressHexa = matcher.group(3);
+                    final String remotePortHexa = matcher.group(4);
+                    final String statusHexa = matcher.group(5);
+                    //final String uid = matcher.group(6);
+                    //final String inode = matcher.group(7);
+                    c.setLocalPort(getInt16(localPortHexa));
+                    c.setRemoteAddress(getAddress(remoteAddressHexa));
+                    c.setRemotePort(getInt16(remotePortHexa));
+                    try {
+                        c.setStatus(STATES[Integer.parseInt(statusHexa, 16) - 1]);
+                    } catch (Exception ex) {
+                        c.setStatus(STATES[11]); // unknown
+                    }
+                    c.setPID(-1); // unknown
+                    c.setPName("UNKNOWN");
+                }
+            }
+            in.close();
+        } catch (Throwable t) { // NOPMD
+            // ignored
+        }
+
+        // read from /proc/net/udp the list of currently openned socket connections
+        try {
+            BufferedReader in = new BufferedReader(new FileReader("/proc/net/udp"));
+            String line;
+            while ((line = in.readLine()) != null) { // NOPMD
+                Matcher matcher = NET_PATTERN.matcher(line);
+                if (matcher.find()) {
+                    final Connection c = new Connection();
+                    c.setProtocol(Connection.UDP_CONNECTION);
+                    net.add(c);
+                    final String localPortHexa = matcher.group(2);
+                    final String remoteAddressHexa = matcher.group(3);
+                    final String remotePortHexa = matcher.group(4);
+                    final String statusHexa = matcher.group(5);
+                    //final String uid = matcher.group(6);
+                    //final String inode = matcher.group(7);
+                    c.setLocalPort(getInt16(localPortHexa));
+                    c.setRemoteAddress(getAddress(remoteAddressHexa));
+                    c.setRemotePort(getInt16(remotePortHexa));
+                    try {
+                        c.setStatus(STATES[Integer.parseInt(statusHexa, 16) - 1]);
+                    } catch (Exception ex) {
+                        c.setStatus(STATES[11]); // unknown
+                    }
+                    c.setPID(-1); // unknown
+                    c.setPName("UNKNOWN");
+                }
+            }
+            in.close();
+        } catch (Throwable t) { // NOPMD
+            // ignored
+        }
+
+        // read from /proc/net/raw the list of currently openned socket connections
+        try {
+            BufferedReader in = new BufferedReader(new FileReader("/proc/net/raw"));
+            String line;
+            while ((line = in.readLine()) != null) { // NOPMD
+                Matcher matcher = NET_PATTERN.matcher(line);
+                if (matcher.find()) {
+                    final Connection c = new Connection();
+                    c.setProtocol(Connection.RAW_CONNECTION);
+                    net.add(c);
+                    //final String localAddressHexa = matcher.group(1);
+                    final String localPortHexa = matcher.group(2);
+                    final String remoteAddressHexa = matcher.group(3);
+                    final String remotePortHexa = matcher.group(4);
+                    final String statusHexa = matcher.group(5);
+                    //final String uid = matcher.group(6);
+                    //final String inode = matcher.group(7);
+                    c.setLocalPort(getInt16(localPortHexa));
+                    c.setRemoteAddress(getAddress(remoteAddressHexa));
+                    c.setRemotePort(getInt16(remotePortHexa));
+                    try {
+                        c.setStatus(STATES[Integer.parseInt(statusHexa, 16) - 1]);
+                    } catch (Exception ex) {
+                        c.setStatus(STATES[11]); // unknown
+                    }
+                    c.setPID(-1); // unknown
+                    c.setPName("UNKNOWN");
+                }
+            }
+            in.close();
+        } catch (Throwable t) { // NOPMD
+            // ignored
+        }
+        return net;
+    }
+
+    /**
+     * Informations about a given connection
+     *
+     * @author Ciprian Dobre
+     */
+    public static class Connection {
+
+        /**
+         * Types of connection protocol
+         ***/
+        public static final byte TCP_CONNECTION = 0;
+        public static final byte UDP_CONNECTION = 1;
+        public static final byte RAW_CONNECTION = 2;
+        /**
+         * <code>serialVersionUID</code>
+         */
+        private static final long serialVersionUID = 1988671591829311032L;
+        /**
+         * The protocol of the connection (can be tcp, udp or raw)
+         */
+        protected byte protocol;
+
+        /**
+         * The owner of the connection (username)
+         */
+        protected String powner;
+
+        /**
+         * The pid of the owner process
+         */
+        protected int pid;
+
+        /**
+         * The name of the program owning the connection
+         */
+        protected String pname;
+
+        /**
+         * Local port
+         */
+        protected int localPort;
+
+        /**
+         * Remote address of the connection
+         */
+        protected String remoteAddress;
+
+        /**
+         * Remote port
+         */
+        protected int remotePort;
+
+        /**
+         * Status of the connection
+         */
+        protected String status;
+
+        public final byte getProtocol() {
+            return protocol;
+        }
+
+        public final void setProtocol(final byte protocol) {
+            this.protocol = protocol;
+        }
+
+        public final String getProtocolAsString() {
+            switch (protocol) {
+                case TCP_CONNECTION:
+                    return "TCP";
+                case UDP_CONNECTION:
+                    return "UDP";
+                case RAW_CONNECTION:
+                    return "RAW";
+            }
+            return "UNKNOWN";
+        }
+
+        public final String getPOwner() {
+            return powner;
+        }
+
+        public final void setPOwner(final String owner) {
+            this.powner = owner;
+        }
+
+        public final int getPID() {
+            return pid;
+        }
+
+        public final void setPID(final int pid) {
+            this.pid = pid;
+        }
+
+        public final String getPName() {
+            return pname;
+        }
+
+        public final void setPName(final String pname) {
+            this.pname = pname;
+        }
+
+        public final int getLocalPort() {
+            return localPort;
+        }
+
+        public final void setLocalPort(final int localPort) {
+            this.localPort = localPort;
+        }
+
+        public final String getRemoteAddress() {
+            return remoteAddress;
+        }
+
+        public final void setRemoteAddress(final String remoteAddress) {
+            this.remoteAddress = remoteAddress;
+        }
+
+        public final int getRemotePort() {
+            return remotePort;
+        }
+
+        public final void setRemotePort(final int remotePort) {
+            this.remotePort = remotePort;
+        }
+
+        public final String getStatus() {
+            return status;
+        }
+
+        public final void setStatus(final String status) {
+            this.status = status;
+        }
+
+        public String toString() {
+            StringBuffer buf = new StringBuffer();
+            buf.append("[Prot=").append(getProtocolAsString());
+            buf.append(",POwner=").append(powner);
+            buf.append(",PID=").append(pid);
+            buf.append(",PName=").append(pname);
+            buf.append(",LPort=").append(localPort);
+            buf.append(",RAddress=").append(remoteAddress);
+            buf.append(",RPort=").append(remotePort);
+            buf.append(",Status=").append(status);
+            buf.append("]");
+            return buf.toString();
+        }
+
+    }
+}

app/src/androidTest/java/org/fdroid/fdroid/SystemAnimations.java

@@ -0,0 +1,62 @@
+package org.fdroid.fdroid;
+
+import android.Manifest;
+import android.content.Context;
+import android.content.pm.PackageManager;
+import android.os.IBinder;
+import android.util.Log;
+
+import java.lang.reflect.Method;
+
+/**
+ * @see <a href="https://artemzin.com/blog/easiest-way-to-give-set_animation_scale-permission-for-your-ui-tests-on-android/>EASIEST WAY TO GIVE SET_ANIMATION_SCALE PERMISSION FOR YOUR UI TESTS ON ANDROID</a>
+ * @see <a href="https://gist.github.com/xrigau/11284124>Disable animations for Espresso tests</a>
+ */
+class SystemAnimations {
+    public static final String TAG = "SystemAnimations";
+
+    private static final float DISABLED = 0.0f;
+    private static final float DEFAULT = 1.0f;
+
+    static void disableAll(Context context) {
+        int permStatus = context.checkCallingOrSelfPermission(Manifest.permission.SET_ANIMATION_SCALE);
+        if (permStatus == PackageManager.PERMISSION_GRANTED) {
+            Log.i(TAG, "Manifest.permission.SET_ANIMATION_SCALE PERMISSION_GRANTED");
+            setSystemAnimationsScale(DISABLED);
+        } else {
+            Log.i(TAG, "Disabling Manifest.permission.SET_ANIMATION_SCALE failed: " + permStatus);
+        }
+    }
+
+    static void enableAll(Context context) {
+        int permStatus = context.checkCallingOrSelfPermission(Manifest.permission.SET_ANIMATION_SCALE);
+        if (permStatus == PackageManager.PERMISSION_GRANTED) {
+            Log.i(TAG, "Manifest.permission.SET_ANIMATION_SCALE PERMISSION_GRANTED");
+            setSystemAnimationsScale(DEFAULT);
+        } else {
+            Log.i(TAG, "Enabling Manifest.permission.SET_ANIMATION_SCALE failed: " + permStatus);
+        }
+    }
+
+    private static void setSystemAnimationsScale(float animationScale) {
+        try {
+            Class<?> windowManagerStubClazz = Class.forName("android.view.IWindowManager$Stub");
+            Method asInterface = windowManagerStubClazz.getDeclaredMethod("asInterface", IBinder.class);
+            Class<?> serviceManagerClazz = Class.forName("android.os.ServiceManager");
+            Method getService = serviceManagerClazz.getDeclaredMethod("getService", String.class);
+            Class<?> windowManagerClazz = Class.forName("android.view.IWindowManager");
+            Method setAnimationScales = windowManagerClazz.getDeclaredMethod("setAnimationScales", float[].class);
+            Method getAnimationScales = windowManagerClazz.getDeclaredMethod("getAnimationScales");
+
+            IBinder windowManagerBinder = (IBinder) getService.invoke(null, "window");
+            Object windowManagerObj = asInterface.invoke(null, windowManagerBinder);
+            float[] currentScales = (float[]) getAnimationScales.invoke(windowManagerObj);
+            for (int i = 0; i < currentScales.length; i++) {
+                currentScales[i] = animationScale;
+            }
+            setAnimationScales.invoke(windowManagerObj, new Object[]{currentScales});
+        } catch (Exception e) {
+            Log.e(TAG, "Could not change animation scale to " + animationScale + " :'(");
+        }
+    }
+}

app/src/androidTest/java/org/fdroid/fdroid/UiWatchers.java

@@ -0,0 +1,156 @@
+/*
+ * Copyright (C) 2013 The Android Open Source Project
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package org.fdroid.fdroid;
+
+import androidx.test.uiautomator.UiDevice;
+import androidx.test.uiautomator.UiObject;
+import androidx.test.uiautomator.UiObjectNotFoundException;
+import androidx.test.uiautomator.UiSelector;
+import androidx.test.uiautomator.UiWatcher;
+import android.util.Log;
+
+import java.util.ArrayList;
+import java.util.Collections;
+import java.util.List;
+
+@SuppressWarnings("MemberName")
+public class UiWatchers {
+    private static final String LOG_TAG = UiWatchers.class.getSimpleName();
+    private final List<String> mErrors = new ArrayList<String>();
+
+    /**
+     * We can use the UiDevice registerWatcher to register a small script to be executed when the
+     * framework is waiting for a control to appear. Waiting may be the cause of an unexpected
+     * dialog on the screen and it is the time when the framework runs the registered watchers.
+     * This is a sample watcher looking for ANR and crashes. it closes it and moves on. You should
+     * create your own watchers and handle error logging properly for your type of tests.
+     */
+    public void registerAnrAndCrashWatchers() {
+        UiDevice.getInstance().registerWatcher("ANR", new UiWatcher() {
+            @Override
+            public boolean checkForCondition() {
+                UiObject window = new UiObject(new UiSelector().className(
+                        "com.android.server.am.AppNotRespondingDialog"));
+                String errorText = null;
+                if (window.exists()) {
+                    try {
+                        errorText = window.getText();
+                    } catch (UiObjectNotFoundException e) {
+                        Log.e(LOG_TAG, "dialog gone?", e);
+                    }
+                    onAnrDetected(errorText);
+                    postHandler("Wait");
+                    return true; // triggered
+                }
+                return false; // no trigger
+            }
+        });
+        // class names may have changed
+        UiDevice.getInstance().registerWatcher("ANR2", new UiWatcher() {
+            @Override
+            public boolean checkForCondition() {
+                UiObject window = new UiObject(new UiSelector().packageName("android")
+                        .textContains("isn't responding."));
+                if (window.exists()) {
+                    String errorText = null;
+                    try {
+                        errorText = window.getText();
+                    } catch (UiObjectNotFoundException e) {
+                        Log.e(LOG_TAG, "dialog gone?", e);
+                    }
+                    onAnrDetected(errorText);
+                    postHandler("Wait");
+                    return true; // triggered
+                }
+                return false; // no trigger
+            }
+        });
+        UiDevice.getInstance().registerWatcher("CRASH", new UiWatcher() {
+            @Override
+            public boolean checkForCondition() {
+                UiObject window = new UiObject(new UiSelector().className(
+                        "com.android.server.am.AppErrorDialog"));
+                if (window.exists()) {
+                    String errorText = null;
+                    try {
+                        errorText = window.getText();
+                    } catch (UiObjectNotFoundException e) {
+                        Log.e(LOG_TAG, "dialog gone?", e);
+                    }
+                    onCrashDetected(errorText);
+                    postHandler("OK");
+                    return true; // triggered
+                }
+                return false; // no trigger
+            }
+        });
+        UiDevice.getInstance().registerWatcher("CRASH2", new UiWatcher() {
+            @Override
+            public boolean checkForCondition() {
+                UiObject window = new UiObject(new UiSelector().packageName("android")
+                        .textContains("has stopped"));
+                if (window.exists()) {
+                    String errorText = null;
+                    try {
+                        errorText = window.getText();
+                    } catch (UiObjectNotFoundException e) {
+                        Log.e(LOG_TAG, "dialog gone?", e);
+                    }
+                    onCrashDetected(errorText);
+                    postHandler("OK");
+                    return true; // triggered
+                }
+                return false; // no trigger
+            }
+        });
+        Log.i(LOG_TAG, "Registered GUI Exception watchers");
+    }
+
+    public void onAnrDetected(String errorText) {
+        mErrors.add(errorText);
+    }
+
+    public void onCrashDetected(String errorText) {
+        mErrors.add(errorText);
+    }
+
+    public void reset() {
+        mErrors.clear();
+    }
+
+    public List<String> getErrors() {
+        return Collections.unmodifiableList(mErrors);
+    }
+
+    /**
+     * Current implementation ignores the exception and continues.
+     */
+    public void postHandler(String buttonText) {
+        // TODO: Add custom error logging here
+        String formatedOutput = String.format("UI Exception Message: %-20s\n", UiDevice
+                .getInstance().getCurrentPackageName());
+        Log.e(LOG_TAG, formatedOutput);
+        UiObject buttonOK = new UiObject(new UiSelector().text(buttonText).enabled(true));
+        // sometimes it takes a while for the OK button to become enabled
+        buttonOK.waitForExists(5000);
+        try {
+            buttonOK.click();
+        } catch (UiObjectNotFoundException e) {
+            e.printStackTrace();
+        }
+    }
+}

app/src/androidTest/java/org/fdroid/fdroid/compat/FileCompatTest.java

@@ -0,0 +1,115 @@
+package org.fdroid.fdroid.compat;
+
+import android.app.Instrumentation;
+import android.content.Context;
+import android.os.Build;
+import android.os.Environment;
+import androidx.test.platform.app.InstrumentationRegistry;
+import androidx.test.ext.junit.runners.AndroidJUnit4;
+import android.util.Log;
+
+import org.fdroid.fdroid.AssetUtils;
+import org.fdroid.fdroid.data.SanitizedFile;
+import org.junit.After;
+import org.junit.Before;
+import org.junit.Test;
+import org.junit.runner.RunWith;
+
+import java.io.File;
+import java.util.UUID;
+
+import static org.junit.Assert.assertFalse;
+import static org.junit.Assert.assertTrue;
+import static org.junit.Assume.assumeTrue;
+
+
+/**
+ * This test needs to run on the emulator, even though it technically could
+ * run as a plain JUnit test, because it is testing the specifics of
+ * Android's symlink handling.
+ */
+@RunWith(AndroidJUnit4.class)
+public class FileCompatTest {
+
+    private static final String TAG = "FileCompatTest";
+
+    private SanitizedFile sourceFile;
+    private SanitizedFile destFile;
+
+    @Before
+    public void setUp() {
+        Instrumentation instrumentation = InstrumentationRegistry.getInstrumentation();
+        File dir = getWriteableDir(instrumentation);
+        sourceFile = SanitizedFile.knownSanitized(
+                AssetUtils.copyAssetToDir(instrumentation.getContext(), "simpleIndex.jar", dir));
+        destFile = new SanitizedFile(dir, "dest-" + UUID.randomUUID() + ".testproduct");
+        assertFalse(destFile.exists());
+        assertTrue(sourceFile.getAbsolutePath() + " should exist.", sourceFile.exists());
+    }
+
+    @After
+    public void tearDown() {
+        if (!sourceFile.delete()) {
+            Log.w(TAG, "Can't delete " + sourceFile.getAbsolutePath() + ".");
+        }
+
+        if (!destFile.delete()) {
+            Log.w(TAG, "Can't delete " + destFile.getAbsolutePath() + ".");
+        }
+    }
+
+    @Test
+    public void testSymlinkRuntime() {
+        FileCompat.symlinkRuntime(sourceFile, destFile);
+        assertTrue(destFile.getAbsolutePath() + " should exist after symlinking", destFile.exists());
+    }
+
+    @Test
+    public void testSymlinkLibcore() {
+        assumeTrue(Build.VERSION.SDK_INT >= 19);
+        FileCompat.symlinkLibcore(sourceFile, destFile);
+        assertTrue(destFile.getAbsolutePath() + " should exist after symlinking", destFile.exists());
+    }
+
+    @Test
+    public void testSymlinkOs() {
+        assumeTrue(Build.VERSION.SDK_INT >= 21);
+        FileCompat.symlinkOs(sourceFile, destFile);
+        assertTrue(destFile.getAbsolutePath() + " should exist after symlinking", destFile.exists());
+    }
+
+
+    /**
+     * Prefer internal over external storage, because external tends to be FAT filesystems,
+     * which don't support symlinks (which we test using this method).
+     */
+    public static File getWriteableDir(Instrumentation instrumentation) {
+        Context context = instrumentation.getContext();
+        Context targetContext = instrumentation.getTargetContext();
+
+        File[] dirsToTry = new File[]{
+                context.getCacheDir(),
+                context.getFilesDir(),
+                targetContext.getCacheDir(),
+                targetContext.getFilesDir(),
+                context.getExternalCacheDir(),
+                context.getExternalFilesDir(null),
+                targetContext.getExternalCacheDir(),
+                targetContext.getExternalFilesDir(null),
+                Environment.getExternalStorageDirectory(),
+        };
+
+        return getWriteableDir(dirsToTry);
+    }
+
+    private static File getWriteableDir(File[] dirsToTry) {
+
+        for (File dir : dirsToTry) {
+            if (dir != null && dir.canWrite()) {
+                return dir;
+            }
+        }
+
+        return null;
+    }
+}

app/src/androidTest/java/org/fdroid/fdroid/installer/ApkVerifierTest.java

@@ -0,0 +1,454 @@
+/*
+ * Copyright (C) 2016 Dominik Schürmann <dominik@dominikschuermann.de>
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
+ * MA 02110-1301, USA.
+ */
+
+package org.fdroid.fdroid.installer;
+
+import android.app.Instrumentation;
+import android.net.Uri;
+import android.os.Build;
+import android.util.Log;
+import androidx.annotation.NonNull;
+import androidx.test.ext.junit.runners.AndroidJUnit4;
+import androidx.test.platform.app.InstrumentationRegistry;
+import org.fdroid.fdroid.AssetUtils;
+import org.fdroid.fdroid.Utils;
+import org.fdroid.fdroid.compat.FileCompatTest;
+import org.fdroid.fdroid.data.Apk;
+import org.fdroid.fdroid.data.Repo;
+import org.fdroid.fdroid.data.RepoXMLHandler;
+import org.fdroid.fdroid.mock.RepoDetails;
+import org.junit.Before;
+import org.junit.Test;
+import org.junit.runner.RunWith;
+
+import java.io.File;
+import java.io.FileInputStream;
+import java.io.IOException;
+import java.io.InputStream;
+import java.util.ArrayList;
+import java.util.Arrays;
+import java.util.HashSet;
+import java.util.TreeSet;
+
+import static org.junit.Assert.assertFalse;
+import static org.junit.Assert.assertTrue;
+import static org.junit.Assert.fail;
+
+/**
+ * This test checks the ApkVerifier by parsing a repo from permissionsRepo.xml
+ * and checking the listed permissions against the ones specified in apks' AndroidManifest,
+ * which have been specifically generated for this test.
+ * <p>
+ * NOTE: This androidTest cannot run as a Robolectric test because the
+ * required methods from PackageManger are not included in Robolectric's Android API.
+ * java.lang.NoClassDefFoundError: java/util/jar/StrictJarFile
+ * at android.content.pm.PackageManager.getPackageArchiveInfo(PackageManager.java:3545)
+ */
+@RunWith(AndroidJUnit4.class)
+public class ApkVerifierTest {
+    public static final String TAG = "ApkVerifierTest";
+
+    Instrumentation instrumentation;
+
+    File sdk14Apk;
+    File minMaxApk;
+    private File extendedPermissionsApk;
+    private File extendedPermsXml;
+
+    @Before
+    public void setUp() {
+        instrumentation = InstrumentationRegistry.getInstrumentation();
+        File dir = FileCompatTest.getWriteableDir(instrumentation);
+        assertTrue(dir.isDirectory());
+        assertTrue(dir.canWrite());
+        sdk14Apk = AssetUtils.copyAssetToDir(instrumentation.getContext(),
+                "org.fdroid.permissions.sdk14.apk",
+                dir
+        );
+        minMaxApk = AssetUtils.copyAssetToDir(instrumentation.getContext(),
+                "org.fdroid.permissions.minmax.apk",
+                dir
+        );
+        extendedPermissionsApk = AssetUtils.copyAssetToDir(instrumentation.getContext(),
+                "org.fdroid.extendedpermissionstest.apk",
+                dir
+        );
+        extendedPermsXml = AssetUtils.copyAssetToDir(instrumentation.getContext(),
+                "extendedPerms.xml",
+                dir
+        );
+        assertTrue(sdk14Apk.exists());
+        assertTrue(minMaxApk.exists());
+        assertTrue(extendedPermissionsApk.exists());
+        assertTrue(extendedPermsXml.exists());
+    }
+
+    @Test
+    public void testNulls() {
+        assertTrue(ApkVerifier.requestedPermissionsEqual(null, null));
+
+        String[] perms = new String[]{"Blah"};
+        assertFalse(ApkVerifier.requestedPermissionsEqual(perms, null));
+        assertFalse(ApkVerifier.requestedPermissionsEqual(null, perms));
+    }
+
+    @Test
+    public void testWithoutPrefix() {
+        Apk apk = new Apk();
+        apk.packageName = "org.fdroid.permissions.sdk14";
+        apk.targetSdkVersion = 14;
+        ArrayList<String> noPrefixPermissionsList = new ArrayList<>(Arrays.asList(
+                "AUTHENTICATE_ACCOUNTS",
+                "MANAGE_ACCOUNTS",
+                "READ_PROFILE",
+                "WRITE_PROFILE",
+                "GET_ACCOUNTS",
+                "READ_CONTACTS",
+                "WRITE_CONTACTS",
+                "WRITE_EXTERNAL_STORAGE",
+                "READ_EXTERNAL_STORAGE",
+                "INTERNET",
+                "ACCESS_NETWORK_STATE",
+                "NFC",
+                "READ_SYNC_SETTINGS",
+                "WRITE_SYNC_SETTINGS",
+                "WRITE_CALL_LOG", // implied-permission!
+                "READ_CALL_LOG" // implied-permission!
+        ));
+        if (Build.VERSION.SDK_INT >= 29) {
+            noPrefixPermissionsList.add("android.permission.ACCESS_MEDIA_LOCATION");
+        }
+        String[] noPrefixPermissions = noPrefixPermissionsList.toArray(new String[0]);
+
+        for (int i = 0; i < noPrefixPermissions.length; i++) {
+            noPrefixPermissions[i] = RepoXMLHandler.fdroidToAndroidPermission(noPrefixPermissions[i]);
+        }
+        apk.requestedPermissions = noPrefixPermissions;
+
+        Uri uri = Uri.fromFile(sdk14Apk);
+        ApkVerifier apkVerifier = new ApkVerifier(instrumentation.getContext(), uri, apk);
+
+        try {
+            apkVerifier.verifyApk();
+        } catch (ApkVerifier.ApkVerificationException | ApkVerifier.ApkPermissionUnequalException e) {
+            e.printStackTrace();
+            fail(e.getMessage());
+        }
+    }
+
+    @Test(expected = ApkVerifier.ApkPermissionUnequalException.class)
+    public void testWithMinMax()
+            throws ApkVerifier.ApkPermissionUnequalException, ApkVerifier.ApkVerificationException {
+        Apk apk = new Apk();
+        apk.packageName = "org.fdroid.permissions.minmax";
+        apk.targetSdkVersion = 24;
+        ArrayList<String> permissionsList = new ArrayList<>();
+        permissionsList.add("android.permission.READ_CALENDAR");
+        if (Build.VERSION.SDK_INT <= 18) {
+            permissionsList.add("android.permission.WRITE_EXTERNAL_STORAGE");
+        }
+        if (Build.VERSION.SDK_INT >= 23) {
+            permissionsList.add("android.permission.ACCESS_FINE_LOCATION");
+        }
+        apk.requestedPermissions = permissionsList.toArray(new String[permissionsList.size()]);
+
+        Uri uri = Uri.fromFile(minMaxApk);
+        ApkVerifier apkVerifier = new ApkVerifier(instrumentation.getContext(), uri, apk);
+        apkVerifier.verifyApk();
+
+        permissionsList.add("ADDITIONAL_PERMISSION");
+        apk.requestedPermissions = permissionsList.toArray(new String[permissionsList.size()]);
+        apkVerifier.verifyApk();
+    }
+
+    @Test
+    public void testWithPrefix() {
+        Apk apk = new Apk();
+        apk.packageName = "org.fdroid.permissions.sdk14";
+        apk.targetSdkVersion = 14;
+        TreeSet<String> expectedSet = new TreeSet<>(Arrays.asList(
+                "android.permission.AUTHENTICATE_ACCOUNTS",
+                "android.permission.MANAGE_ACCOUNTS",
+                "android.permission.READ_PROFILE",
+                "android.permission.WRITE_PROFILE",
+                "android.permission.GET_ACCOUNTS",
+                "android.permission.READ_CONTACTS",
+                "android.permission.WRITE_CONTACTS",
+                "android.permission.WRITE_EXTERNAL_STORAGE",
+                "android.permission.READ_EXTERNAL_STORAGE",
+                "android.permission.INTERNET",
+                "android.permission.ACCESS_NETWORK_STATE",
+                "android.permission.NFC",
+                "android.permission.READ_SYNC_SETTINGS",
+                "android.permission.WRITE_SYNC_SETTINGS",
+                "android.permission.WRITE_CALL_LOG", // implied-permission!
+                "android.permission.READ_CALL_LOG"// implied-permission!
+        ));
+        if (Build.VERSION.SDK_INT >= 29) {
+            expectedSet.add("android.permission.ACCESS_MEDIA_LOCATION");
+        }
+        apk.requestedPermissions = expectedSet.toArray(new String[0]);
+
+        Uri uri = Uri.fromFile(sdk14Apk);
+
+        ApkVerifier apkVerifier = new ApkVerifier(instrumentation.getContext(), uri, apk);
+
+        try {
+            apkVerifier.verifyApk();
+        } catch (ApkVerifier.ApkVerificationException | ApkVerifier.ApkPermissionUnequalException e) {
+            e.printStackTrace();
+            fail(e.getMessage());
+        }
+    }
+
+    /**
+     * Additional permissions are okay. The user is simply
+     * warned about a permission that is not used inside the apk
+     */
+    @Test(expected = ApkVerifier.ApkPermissionUnequalException.class)
+    public void testAdditionalPermission()
+            throws ApkVerifier.ApkPermissionUnequalException, ApkVerifier.ApkVerificationException {
+        Apk apk = new Apk();
+        apk.packageName = "org.fdroid.permissions.sdk14";
+        apk.targetSdkVersion = 14;
+        apk.requestedPermissions = new String[]{
+                "android.permission.AUTHENTICATE_ACCOUNTS",
+                "android.permission.MANAGE_ACCOUNTS",
+                "android.permission.READ_PROFILE",
+                "android.permission.WRITE_PROFILE",
+                "android.permission.GET_ACCOUNTS",
+                "android.permission.READ_CONTACTS",
+                "android.permission.WRITE_CONTACTS",
+                "android.permission.WRITE_EXTERNAL_STORAGE",
+                "android.permission.READ_EXTERNAL_STORAGE",
+                "android.permission.INTERNET",
+                "android.permission.ACCESS_NETWORK_STATE",
+                "android.permission.NFC",
+                "android.permission.READ_SYNC_SETTINGS",
+                "android.permission.WRITE_SYNC_SETTINGS",
+                "android.permission.WRITE_CALL_LOG", // implied-permission!
+                "android.permission.READ_CALL_LOG", // implied-permission!
+                "android.permission.FAKE_NEW_PERMISSION",
+        };
+
+        Uri uri = Uri.fromFile(sdk14Apk);
+        ApkVerifier apkVerifier = new ApkVerifier(instrumentation.getContext(), uri, apk);
+        apkVerifier.verifyApk();
+    }
+
+    /**
+     * Missing permissions are not okay!
+     * The user is then not warned about a permission that the apk uses!
+     */
+    @Test
+    public void testMissingPermission() {
+        Apk apk = new Apk();
+        apk.packageName = "org.fdroid.permissions.sdk14";
+        apk.targetSdkVersion = 14;
+        apk.requestedPermissions = new String[]{
+                //"android.permission.AUTHENTICATE_ACCOUNTS",
+                "android.permission.MANAGE_ACCOUNTS",
+                "android.permission.READ_PROFILE",
+                "android.permission.WRITE_PROFILE",
+                "android.permission.GET_ACCOUNTS",
+                "android.permission.READ_CONTACTS",
+                "android.permission.WRITE_CONTACTS",
+                "android.permission.WRITE_EXTERNAL_STORAGE",
+                "android.permission.READ_EXTERNAL_STORAGE",
+                "android.permission.INTERNET",
+                "android.permission.ACCESS_NETWORK_STATE",
+                "android.permission.NFC",
+                "android.permission.READ_SYNC_SETTINGS",
+                "android.permission.WRITE_SYNC_SETTINGS",
+                "android.permission.WRITE_CALL_LOG", // implied-permission!
+                "android.permission.READ_CALL_LOG", // implied-permission!
+        };
+
+        Uri uri = Uri.fromFile(sdk14Apk);
+
+        ApkVerifier apkVerifier = new ApkVerifier(instrumentation.getContext(), uri, apk);
+
+        try {
+            apkVerifier.verifyApk();
+            fail();
+        } catch (ApkVerifier.ApkVerificationException e) {
+            e.printStackTrace();
+            fail(e.getMessage());
+        } catch (ApkVerifier.ApkPermissionUnequalException e) {
+            e.printStackTrace();
+        }
+    }
+
+    @Test
+    public void testExtendedPerms() throws IOException,
+            ApkVerifier.ApkPermissionUnequalException, ApkVerifier.ApkVerificationException {
+        RepoDetails actualDetails = getFromFile(extendedPermsXml);
+        HashSet<String> expectedSet = new HashSet<>(Arrays.asList(
+                "android.permission.ACCESS_NETWORK_STATE",
+                "android.permission.ACCESS_WIFI_STATE",
+                "android.permission.INTERNET",
+                "android.permission.READ_SYNC_STATS",
+                "android.permission.READ_SYNC_SETTINGS",
+                "android.permission.WRITE_SYNC_SETTINGS",
+                "android.permission.REQUEST_IGNORE_BATTERY_OPTIMIZATIONS",
+                "android.permission.READ_CONTACTS",
+                "android.permission.WRITE_CONTACTS",
+                "android.permission.READ_CALENDAR",
+                "android.permission.WRITE_CALENDAR"
+        ));
+        if (Build.VERSION.SDK_INT <= 18) {
+            expectedSet.add("android.permission.READ_EXTERNAL_STORAGE");
+            expectedSet.add("android.permission.WRITE_EXTERNAL_STORAGE");
+        }
+        if (Build.VERSION.SDK_INT <= 22) {
+            expectedSet.add("android.permission.GET_ACCOUNTS");
+            expectedSet.add("android.permission.AUTHENTICATE_ACCOUNTS");
+            expectedSet.add("android.permission.MANAGE_ACCOUNTS");
+        }
+        if (Build.VERSION.SDK_INT >= 23) {
+            expectedSet.add("android.permission.CAMERA");
+            if (Build.VERSION.SDK_INT <= 23) {
+                expectedSet.add("android.permission.CALL_PHONE");
+            }
+        }
+        Apk apk = actualDetails.apks.get(0);
+        HashSet<String> actualSet = new HashSet<>(Arrays.asList(apk.requestedPermissions));
+        for (String permission : expectedSet) {
+            if (!actualSet.contains(permission)) {
+                Log.i(TAG, permission + " in expected but not actual! (android-"
+                        + Build.VERSION.SDK_INT + ")");
+            }
+        }
+        for (String permission : actualSet) {
+            if (!expectedSet.contains(permission)) {
+                Log.i(TAG, permission + " in actual but not expected! (android-"
+                        + Build.VERSION.SDK_INT + ")");
+            }
+        }
+        String[] expectedPermissions = expectedSet.toArray(new String[expectedSet.size()]);
+        assertTrue(ApkVerifier.requestedPermissionsEqual(expectedPermissions, apk.requestedPermissions));
+
+        String[] badPermissions = Arrays.copyOf(expectedPermissions, expectedPermissions.length + 1);
+        assertFalse(ApkVerifier.requestedPermissionsEqual(badPermissions, apk.requestedPermissions));
+        badPermissions[badPermissions.length - 1] = "notarealpermission";
+        assertFalse(ApkVerifier.requestedPermissionsEqual(badPermissions, apk.requestedPermissions));
+
+        Uri uri = Uri.fromFile(extendedPermissionsApk);
+        ApkVerifier apkVerifier = new ApkVerifier(instrumentation.getContext(), uri, apk);
+        apkVerifier.verifyApk();
+    }
+
+    @Test
+    public void testImpliedPerms() throws IOException {
+        RepoDetails actualDetails = getFromFile(extendedPermsXml);
+        TreeSet<String> expectedSet = new TreeSet<>(Arrays.asList(
+                "android.permission.ACCESS_NETWORK_STATE",
+                "android.permission.ACCESS_WIFI_STATE",
+                "android.permission.INTERNET",
+                "android.permission.READ_CALENDAR",
+                "android.permission.READ_CONTACTS",
+                "android.permission.READ_EXTERNAL_STORAGE",
+                "android.permission.READ_SYNC_SETTINGS",
+                "android.permission.REQUEST_IGNORE_BATTERY_OPTIMIZATIONS",
+                "android.permission.WRITE_CALENDAR",
+                "android.permission.WRITE_CONTACTS",
+                "android.permission.WRITE_EXTERNAL_STORAGE",
+                "android.permission.WRITE_SYNC_SETTINGS",
+                "org.dmfs.permission.READ_TASKS",
+                "org.dmfs.permission.WRITE_TASKS"
+        ));
+        if (Build.VERSION.SDK_INT <= 22) { // maxSdkVersion="22"
+            expectedSet.addAll(Arrays.asList(
+                    "android.permission.AUTHENTICATE_ACCOUNTS",
+                    "android.permission.GET_ACCOUNTS",
+                    "android.permission.MANAGE_ACCOUNTS"
+            ));
+        }
+        if (Build.VERSION.SDK_INT >= 29) {
+            expectedSet.add("android.permission.ACCESS_MEDIA_LOCATION");
+        }
+        Apk apk = actualDetails.apks.get(1);
+        Log.i(TAG, "APK: " + apk.apkName);
+        HashSet<String> actualSet = new HashSet<>(Arrays.asList(apk.requestedPermissions));
+        for (String permission : expectedSet) {
+            if (!actualSet.contains(permission)) {
+                Log.i(TAG, permission + " in expected but not actual! (android-"
+                        + Build.VERSION.SDK_INT + ")");
+            }
+        }
+        for (String permission : actualSet) {
+            if (!expectedSet.contains(permission)) {
+                Log.i(TAG, permission + " in actual but not expected! (android-"
+                        + Build.VERSION.SDK_INT + ")");
+            }
+        }
+        String[] expectedPermissions = expectedSet.toArray(new String[expectedSet.size()]);
+        assertTrue(ApkVerifier.requestedPermissionsEqual(expectedPermissions, apk.requestedPermissions));
+
+        expectedSet = new TreeSet<>(Arrays.asList(
+                "android.permission.ACCESS_NETWORK_STATE",
+                "android.permission.ACCESS_WIFI_STATE",
+                "android.permission.AUTHENTICATE_ACCOUNTS",
+                "android.permission.GET_ACCOUNTS",
+                "android.permission.INTERNET",
+                "android.permission.MANAGE_ACCOUNTS",
+                "android.permission.READ_CALENDAR",
+                "android.permission.READ_CONTACTS",
+                "android.permission.READ_EXTERNAL_STORAGE",
+                "android.permission.READ_SYNC_SETTINGS",
+                "android.permission.WRITE_CALENDAR",
+                "android.permission.WRITE_CONTACTS",
+                "android.permission.WRITE_EXTERNAL_STORAGE",
+                "android.permission.WRITE_SYNC_SETTINGS",
+                "org.dmfs.permission.READ_TASKS",
+                "org.dmfs.permission.WRITE_TASKS"
+        ));
+        if (Build.VERSION.SDK_INT >= 29) {
+            expectedSet.add("android.permission.ACCESS_MEDIA_LOCATION");
+        }
+        expectedPermissions = expectedSet.toArray(new String[expectedSet.size()]);
+        apk = actualDetails.apks.get(2);
+        Log.i(TAG, "APK: " + apk.apkName);
+        actualSet = new HashSet<>(Arrays.asList(apk.requestedPermissions));
+        for (String permission : expectedSet) {
+            if (!actualSet.contains(permission)) {
+                Log.i(TAG, permission + " in expected but not actual! (android-"
+                        + Build.VERSION.SDK_INT + ")");
+            }
+        }
+        for (String permission : actualSet) {
+            if (!expectedSet.contains(permission)) {
+                Log.i(TAG, permission + " in actual but not expected! (android-"
+                        + Build.VERSION.SDK_INT + ")");
+            }
+        }
+        assertTrue(ApkVerifier.requestedPermissionsEqual(expectedPermissions, apk.requestedPermissions));
+    }
+
+    @NonNull
+    private RepoDetails getFromFile(File indexFile) throws IOException {
+        InputStream inputStream = null;
+        try {
+            inputStream = new FileInputStream(indexFile);
+            return RepoDetails.getFromFile(inputStream, Repo.PUSH_REQUEST_IGNORE);
+        } finally {
+            Utils.closeQuietly(inputStream);
+        }
+    }
+}

app/src/androidTest/java/org/fdroid/fdroid/nearby/BonjourManagerTest.java

@@ -0,0 +1,128 @@
+package org.fdroid.fdroid.nearby;
+
+import android.content.Context;
+
+import androidx.test.core.app.ApplicationProvider;
+import androidx.test.ext.junit.runners.AndroidJUnit4;
+
+import org.fdroid.fdroid.FDroidApp;
+import org.junit.Test;
+import org.junit.runner.RunWith;
+
+import java.util.concurrent.CountDownLatch;
+import java.util.concurrent.TimeUnit;
+
+import javax.jmdns.ServiceEvent;
+import javax.jmdns.ServiceListener;
+
+import static org.junit.Assert.assertTrue;
+
+@RunWith(AndroidJUnit4.class)
+public class BonjourManagerTest {
+
+    private static final String NAME = "Robolectric-test";
+    private static final String LOCALHOST = "localhost";
+    private static final int PORT = 8888;
+
+    @Test
+    public void testStartStop() throws InterruptedException {
+        Context context = ApplicationProvider.getApplicationContext();
+
+        FDroidApp.ipAddressString = LOCALHOST;
+        FDroidApp.port = PORT;
+
+        final CountDownLatch addedLatch = new CountDownLatch(1);
+        final CountDownLatch resolvedLatch = new CountDownLatch(1);
+        final CountDownLatch removedLatch = new CountDownLatch(1);
+        BonjourManager.start(context, NAME, false,
+                new ServiceListener() {
+                    @Override
+                    public void serviceAdded(ServiceEvent serviceEvent) {
+                        System.out.println("Service added: " + serviceEvent.getInfo());
+                        if (NAME.equals(serviceEvent.getName())) {
+                            addedLatch.countDown();
+                        }
+                    }
+
+                    @Override
+                    public void serviceRemoved(ServiceEvent serviceEvent) {
+                        System.out.println("Service removed: " + serviceEvent.getInfo());
+                        removedLatch.countDown();
+                    }
+
+                    @Override
+                    public void serviceResolved(ServiceEvent serviceEvent) {
+                        System.out.println("Service resolved: " + serviceEvent.getInfo());
+                        if (NAME.equals(serviceEvent.getName())) {
+                            resolvedLatch.countDown();
+                        }
+                    }
+                }, getBlankServiceListener());
+        BonjourManager.setVisible(context, true);
+        assertTrue(addedLatch.await(30, TimeUnit.SECONDS));
+        assertTrue(resolvedLatch.await(30, TimeUnit.SECONDS));
+        BonjourManager.setVisible(context, false);
+        assertTrue(removedLatch.await(30, TimeUnit.SECONDS));
+        BonjourManager.stop(context);
+    }
+
+    @Test
+    public void testRestart() throws InterruptedException {
+        Context context = ApplicationProvider.getApplicationContext();
+
+        FDroidApp.ipAddressString = LOCALHOST;
+        FDroidApp.port = PORT;
+
+        BonjourManager.start(context, NAME, false, getBlankServiceListener(), getBlankServiceListener());
+
+        final CountDownLatch addedLatch = new CountDownLatch(1);
+        final CountDownLatch resolvedLatch = new CountDownLatch(1);
+        final CountDownLatch removedLatch = new CountDownLatch(1);
+        BonjourManager.restart(context, NAME, false,
+                new ServiceListener() {
+                    @Override
+                    public void serviceAdded(ServiceEvent serviceEvent) {
+                        System.out.println("Service added: " + serviceEvent.getInfo());
+                        if (NAME.equals(serviceEvent.getName())) {
+                            addedLatch.countDown();
+                        }
+                    }
+
+                    @Override
+                    public void serviceRemoved(ServiceEvent serviceEvent) {
+                        System.out.println("Service removed: " + serviceEvent.getInfo());
+                        removedLatch.countDown();
+                    }
+
+                    @Override
+                    public void serviceResolved(ServiceEvent serviceEvent) {
+                        System.out.println("Service resolved: " + serviceEvent.getInfo());
+                        if (NAME.equals(serviceEvent.getName())) {
+                            resolvedLatch.countDown();
+                        }
+                    }
+                }, getBlankServiceListener());
+        BonjourManager.setVisible(context, true);
+        assertTrue(addedLatch.await(30, TimeUnit.SECONDS));
+        assertTrue(resolvedLatch.await(30, TimeUnit.SECONDS));
+        BonjourManager.setVisible(context, false);
+        assertTrue(removedLatch.await(30, TimeUnit.SECONDS));
+        BonjourManager.stop(context);
+    }
+
+    private ServiceListener getBlankServiceListener() {
+        return new ServiceListener() {
+            @Override
+            public void serviceAdded(ServiceEvent serviceEvent) {
+            }
+
+            @Override
+            public void serviceRemoved(ServiceEvent serviceEvent) {
+            }
+
+            @Override
+            public void serviceResolved(ServiceEvent serviceEvent) {
+            }
+        };
+    }
+}

app/src/androidTest/java/org/fdroid/fdroid/nearby/LocalHTTPDManagerTest.java

@@ -0,0 +1,192 @@
+package org.fdroid.fdroid.nearby;
+
+import android.content.BroadcastReceiver;
+import android.content.Context;
+import android.content.Intent;
+import android.content.IntentFilter;
+
+import androidx.test.core.app.ApplicationProvider;
+import androidx.test.filters.LargeTest;
+import androidx.test.ext.junit.runners.AndroidJUnit4;
+import androidx.localbroadcastmanager.content.LocalBroadcastManager;
+import android.util.Log;
+import org.fdroid.fdroid.FDroidApp;
+import org.fdroid.fdroid.Netstat;
+import org.fdroid.fdroid.Utils;
+import org.junit.After;
+import org.junit.Before;
+import org.junit.Ignore;
+import org.junit.Test;
+import org.junit.runner.RunWith;
+
+import java.io.IOException;
+import java.net.ServerSocket;
+import java.util.concurrent.CountDownLatch;
+import java.util.concurrent.TimeUnit;
+
+import static org.junit.Assert.assertFalse;
+import static org.junit.Assert.assertNotEquals;
+import static org.junit.Assert.assertTrue;
+import static org.junit.Assert.fail;
+
+@LargeTest
+@RunWith(AndroidJUnit4.class)
+public class LocalHTTPDManagerTest {
+    private static final String TAG = "LocalHTTPDManagerTest";
+
+    private Context context;
+    private LocalBroadcastManager lbm;
+
+    private static final String LOCALHOST = "localhost";
+    private static final int PORT = 8888;
+
+    @Before
+    public void setUp() {
+        context = ApplicationProvider.getApplicationContext();
+        lbm = LocalBroadcastManager.getInstance(context);
+
+        FDroidApp.ipAddressString = LOCALHOST;
+        FDroidApp.port = PORT;
+
+        for (Netstat.Connection connection : Netstat.getConnections()) { // NOPMD
+            Log.i("LocalHTTPDManagerTest", "connection: " + connection.toString());
+        }
+        assertFalse(Utils.isServerSocketInUse(PORT));
+        LocalHTTPDManager.stop(context);
+
+        for (Netstat.Connection connection : Netstat.getConnections()) { // NOPMD
+            Log.i("LocalHTTPDManagerTest", "connection: " + connection.toString());
+        }
+    }
+
+    @After
+    public void tearDown() {
+        lbm.unregisterReceiver(startedReceiver);
+        lbm.unregisterReceiver(stoppedReceiver);
+        lbm.unregisterReceiver(errorReceiver);
+    }
+
+    @Ignore
+    @Test
+    public void testStartStop() throws InterruptedException {
+        Log.i(TAG, "testStartStop");
+
+        final CountDownLatch startLatch = new CountDownLatch(1);
+        BroadcastReceiver latchReceiver = new BroadcastReceiver() {
+            @Override
+            public void onReceive(Context context, Intent intent) {
+                startLatch.countDown();
+            }
+        };
+        lbm.registerReceiver(latchReceiver, new IntentFilter(LocalHTTPDManager.ACTION_STARTED));
+        lbm.registerReceiver(stoppedReceiver, new IntentFilter(LocalHTTPDManager.ACTION_STOPPED));
+        lbm.registerReceiver(errorReceiver, new IntentFilter(LocalHTTPDManager.ACTION_ERROR));
+        LocalHTTPDManager.start(context, false);
+        assertTrue(startLatch.await(30, TimeUnit.SECONDS));
+        assertTrue(Utils.isServerSocketInUse(PORT));
+        assertTrue(Utils.canConnectToSocket(LOCALHOST, PORT));
+        lbm.unregisterReceiver(latchReceiver);
+        lbm.unregisterReceiver(stoppedReceiver);
+        lbm.unregisterReceiver(errorReceiver);
+
+        final CountDownLatch stopLatch = new CountDownLatch(1);
+        latchReceiver = new BroadcastReceiver() {
+            @Override
+            public void onReceive(Context context, Intent intent) {
+                stopLatch.countDown();
+            }
+        };
+        lbm.registerReceiver(startedReceiver, new IntentFilter(LocalHTTPDManager.ACTION_STARTED));
+        lbm.registerReceiver(latchReceiver, new IntentFilter(LocalHTTPDManager.ACTION_STOPPED));
+        lbm.registerReceiver(errorReceiver, new IntentFilter(LocalHTTPDManager.ACTION_ERROR));
+        LocalHTTPDManager.stop(context);
+        assertTrue(stopLatch.await(30, TimeUnit.SECONDS));
+        assertFalse(Utils.isServerSocketInUse(PORT));
+        assertFalse(Utils.canConnectToSocket(LOCALHOST, PORT)); // if this is flaky, just remove it
+        lbm.unregisterReceiver(latchReceiver);
+    }
+
+    @Test
+    public void testError() throws InterruptedException, IOException {
+        Log.i("LocalHTTPDManagerTest", "testError");
+        ServerSocket blockerSocket = new ServerSocket(PORT);
+
+        final CountDownLatch latch = new CountDownLatch(1);
+        BroadcastReceiver latchReceiver = new BroadcastReceiver() {
+            @Override
+            public void onReceive(Context context, Intent intent) {
+                latch.countDown();
+            }
+        };
+        lbm.registerReceiver(startedReceiver, new IntentFilter(LocalHTTPDManager.ACTION_STARTED));
+        lbm.registerReceiver(stoppedReceiver, new IntentFilter(LocalHTTPDManager.ACTION_STOPPED));
+        lbm.registerReceiver(latchReceiver, new IntentFilter(LocalHTTPDManager.ACTION_ERROR));
+        LocalHTTPDManager.start(context, false);
+        assertTrue(latch.await(30, TimeUnit.SECONDS));
+        assertTrue(Utils.isServerSocketInUse(PORT));
+        assertNotEquals(PORT, FDroidApp.port);
+        assertFalse(Utils.isServerSocketInUse(FDroidApp.port));
+        lbm.unregisterReceiver(latchReceiver);
+        blockerSocket.close();
+    }
+
+    @Test
+    public void testRestart() throws InterruptedException, IOException {
+        Log.i("LocalHTTPDManagerTest", "testRestart");
+        assertFalse(Utils.isServerSocketInUse(PORT));
+        final CountDownLatch startLatch = new CountDownLatch(1);
+        BroadcastReceiver latchReceiver = new BroadcastReceiver() {
+            @Override
+            public void onReceive(Context context, Intent intent) {
+                startLatch.countDown();
+            }
+        };
+        lbm.registerReceiver(latchReceiver, new IntentFilter(LocalHTTPDManager.ACTION_STARTED));
+        lbm.registerReceiver(stoppedReceiver, new IntentFilter(LocalHTTPDManager.ACTION_STOPPED));
+        lbm.registerReceiver(errorReceiver, new IntentFilter(LocalHTTPDManager.ACTION_ERROR));
+        LocalHTTPDManager.start(context, false);
+        assertTrue(startLatch.await(30, TimeUnit.SECONDS));
+        assertTrue(Utils.isServerSocketInUse(PORT));
+        lbm.unregisterReceiver(latchReceiver);
+        lbm.unregisterReceiver(stoppedReceiver);
+
+        final CountDownLatch restartLatch = new CountDownLatch(1);
+        latchReceiver = new BroadcastReceiver() {
+            @Override
+            public void onReceive(Context context, Intent intent) {
+                restartLatch.countDown();
+            }
+        };
+        lbm.registerReceiver(latchReceiver, new IntentFilter(LocalHTTPDManager.ACTION_STARTED));
+        LocalHTTPDManager.restart(context, false);
+        assertTrue(restartLatch.await(30, TimeUnit.SECONDS));
+        lbm.unregisterReceiver(latchReceiver);
+    }
+
+    private final BroadcastReceiver startedReceiver = new BroadcastReceiver() {
+        @Override
+        public void onReceive(Context context, Intent intent) {
+            String message = intent.getStringExtra(Intent.EXTRA_TEXT);
+            Log.i(TAG, "startedReceiver: " + message);
+            fail();
+        }
+    };
+
+    private final BroadcastReceiver stoppedReceiver = new BroadcastReceiver() {
+        @Override
+        public void onReceive(Context context, Intent intent) {
+            String message = intent.getStringExtra(Intent.EXTRA_TEXT);
+            Log.i(TAG, "stoppedReceiver: " + message);
+            fail();
+        }
+    };
+
+    private final BroadcastReceiver errorReceiver = new BroadcastReceiver() {
+        @Override
+        public void onReceive(Context context, Intent intent) {
+            String message = intent.getStringExtra(Intent.EXTRA_TEXT);
+            Log.i(TAG, "errorReceiver: " + message);
+            fail();
+        }
+    };
+}

app/src/androidTest/java/org/fdroid/fdroid/net/HttpDownloaderTest.java

@@ -0,0 +1,159 @@
+
+package org.fdroid.fdroid.net;
+
+import android.net.Uri;
+import android.os.Build;
+import android.util.Log;
+import org.fdroid.fdroid.ProgressListener;
+import org.junit.Test;
+
+import java.io.File;
+import java.io.IOException;
+import java.util.ArrayList;
+import java.util.Arrays;
+import java.util.concurrent.CountDownLatch;
+import java.util.concurrent.TimeUnit;
+
+import static org.junit.Assert.assertFalse;
+import static org.junit.Assert.assertTrue;
+import static org.junit.Assert.fail;
+
+public class HttpDownloaderTest {
+    private static final String TAG = "HttpDownloaderTest";
+
+    static final String[] URLS;
+
+    // https://developer.android.com/reference/javax/net/ssl/SSLContext
+    static {
+        ArrayList<String> tempUrls = new ArrayList<>(Arrays.asList(
+                "https://f-droid.org/repo/index-v1.jar",
+                // sites that use SNI for HTTPS
+                "https://mirrors.kernel.org/debian/dists/stable/Release",
+                "https://fdroid.tetaneutral.net/fdroid/repo/index-v1.jar",
+                "https://ftp.fau.de/fdroid/repo/index-v1.jar",
+                //"https://microg.org/fdroid/repo/index-v1.jar",
+                //"https://grobox.de/fdroid/repo/index.jar",
+                "https://guardianproject.info/fdroid/repo/index-v1.jar"
+        ));
+        if (Build.VERSION.SDK_INT >= 22) {
+            tempUrls.addAll(Arrays.asList(
+                    "https://en.wikipedia.org/wiki/Index.html", // no SNI but weird ipv6 lookup issues
+                    "https://mirror.cyberbits.eu/fdroid/repo/index-v1.jar"  // TLSv1.2 only and SNI
+            ));
+        }
+        URLS = tempUrls.toArray(new String[tempUrls.size()]);
+    }
+
+    private boolean receivedProgress;
+
+    @Test
+    public void downloadUninterruptedTest() throws IOException, InterruptedException {
+        for (String urlString : URLS) {
+            Log.i(TAG, "URL: " + urlString);
+            Uri uri = Uri.parse(urlString);
+            File destFile = File.createTempFile("dl-", "");
+            HttpDownloader httpDownloader = new HttpDownloader(uri, destFile);
+            httpDownloader.download();
+            assertTrue(destFile.exists());
+            assertTrue(destFile.canRead());
+            destFile.deleteOnExit();
+        }
+    }
+
+    @Test
+    public void downloadUninterruptedTestWithProgress() throws IOException, InterruptedException {
+        final CountDownLatch latch = new CountDownLatch(1);
+        String urlString = "https://f-droid.org/repo/index.jar";
+        receivedProgress = false;
+        Uri uri = Uri.parse(urlString);
+        File destFile = File.createTempFile("dl-", "");
+        final HttpDownloader httpDownloader = new HttpDownloader(uri, destFile);
+        httpDownloader.setListener(new ProgressListener() {
+            @Override
+            public void onProgress(long bytesRead, long totalBytes) {
+                receivedProgress = true;
+            }
+        });
+        new Thread() {
+            @Override
+            public void run() {
+                try {
+                    httpDownloader.download();
+                    latch.countDown();
+                } catch (IOException | InterruptedException e) {
+                    e.printStackTrace();
+                    fail();
+                }
+            }
+        }.start();
+        latch.await(100, TimeUnit.SECONDS); // either 2 progress reports or 100 seconds
+        assertTrue(destFile.exists());
+        assertTrue(destFile.canRead());
+        assertTrue(receivedProgress);
+        destFile.deleteOnExit();
+    }
+
+    @Test
+    public void downloadHttpBasicAuth() throws IOException, InterruptedException {
+        Uri uri = Uri.parse("https://httpbin.org/basic-auth/myusername/supersecretpassword");
+        File destFile = File.createTempFile("dl-", "");
+        HttpDownloader httpDownloader = new HttpDownloader(uri, destFile, "myusername", "supersecretpassword");
+        httpDownloader.download();
+        assertTrue(destFile.exists());
+        assertTrue(destFile.canRead());
+        destFile.deleteOnExit();
+    }
+
+    @Test(expected = IOException.class)
+    public void downloadHttpBasicAuthWrongPassword() throws IOException, InterruptedException {
+        Uri uri = Uri.parse("https://httpbin.org/basic-auth/myusername/supersecretpassword");
+        File destFile = File.createTempFile("dl-", "");
+        HttpDownloader httpDownloader = new HttpDownloader(uri, destFile, "myusername", "wrongpassword");
+        httpDownloader.download();
+        assertFalse(destFile.exists());
+        destFile.deleteOnExit();
+    }
+
+    @Test(expected = IOException.class)
+    public void downloadHttpBasicAuthWrongUsername() throws IOException, InterruptedException {
+        Uri uri = Uri.parse("https://httpbin.org/basic-auth/myusername/supersecretpassword");
+        File destFile = File.createTempFile("dl-", "");
+        HttpDownloader httpDownloader = new HttpDownloader(uri, destFile, "wrongusername", "supersecretpassword");
+        httpDownloader.download();
+        assertFalse(destFile.exists());
+        destFile.deleteOnExit();
+    }
+
+    @Test
+    public void downloadThenCancel() throws IOException, InterruptedException {
+        final CountDownLatch latch = new CountDownLatch(2);
+        Uri uri = Uri.parse("https://f-droid.org/repo/index.jar");
+        File destFile = File.createTempFile("dl-", "");
+        final HttpDownloader httpDownloader = new HttpDownloader(uri, destFile);
+        httpDownloader.setListener(new ProgressListener() {
+            @Override
+            public void onProgress(long bytesRead, long totalBytes) {
+                receivedProgress = true;
+                latch.countDown();
+            }
+        });
+        new Thread() {
+            @Override
+            public void run() {
+                try {
+                    httpDownloader.download();
+                    fail();
+                } catch (IOException e) {
+                    e.printStackTrace();
+                    fail();
+                } catch (InterruptedException e) {
+                    // success!
+                }
+            }
+        }.start();
+        latch.await(100, TimeUnit.SECONDS); // either 2 progress reports or 100 seconds
+        httpDownloader.cancelDownload();
+        assertTrue(receivedProgress);
+        destFile.deleteOnExit();
+    }
+}

app/src/androidTest/java/org/fdroid/fdroid/updater/SwapRepoEmulatorTest.java

@@ -0,0 +1,203 @@
+package org.fdroid.fdroid.updater;
+
+import android.content.ContentValues;
+import android.content.Context;
+import android.content.Intent;
+import android.content.pm.ApplicationInfo;
+import android.content.pm.ResolveInfo;
+import android.os.Looper;
+import androidx.test.platform.app.InstrumentationRegistry;
+import androidx.test.filters.LargeTest;
+import android.text.TextUtils;
+import android.util.Log;
+import org.fdroid.fdroid.BuildConfig;
+import org.fdroid.fdroid.FDroidApp;
+import org.fdroid.fdroid.Hasher;
+import org.fdroid.fdroid.IndexUpdater;
+import org.fdroid.fdroid.Preferences;
+import org.fdroid.fdroid.Utils;
+import org.fdroid.fdroid.data.Apk;
+import org.fdroid.fdroid.data.ApkProvider;
+import org.fdroid.fdroid.data.App;
+import org.fdroid.fdroid.data.AppProvider;
+import org.fdroid.fdroid.data.Repo;
+import org.fdroid.fdroid.data.RepoProvider;
+import org.fdroid.fdroid.data.Schema;
+import org.fdroid.fdroid.nearby.LocalHTTPD;
+import org.fdroid.fdroid.nearby.LocalRepoKeyStore;
+import org.fdroid.fdroid.nearby.LocalRepoManager;
+import org.fdroid.fdroid.nearby.LocalRepoService;
+import org.junit.Ignore;
+import org.junit.Test;
+
+import java.io.File;
+import java.io.IOException;
+import java.net.Socket;
+import java.security.cert.Certificate;
+import java.util.Date;
+import java.util.HashSet;
+import java.util.List;
+import java.util.UUID;
+import java.util.concurrent.CountDownLatch;
+import java.util.concurrent.TimeUnit;
+
+import static org.junit.Assert.assertEquals;
+import static org.junit.Assert.assertFalse;
+import static org.junit.Assert.assertNotEquals;
+import static org.junit.Assert.assertNotNull;
+import static org.junit.Assert.assertNull;
+import static org.junit.Assert.assertTrue;
+
+@LargeTest
+public class SwapRepoEmulatorTest {
+    public static final String TAG = "SwapRepoEmulatorTest";
+
+    /**
+     * @see org.fdroid.fdroid.nearby.WifiStateChangeService.WifiInfoThread#run()
+     */
+    @Ignore
+    @Test
+    public void testSwap()
+            throws IOException, LocalRepoKeyStore.InitException, IndexUpdater.UpdateException, InterruptedException {
+        Looper.prepare();
+        LocalHTTPD localHttpd = null;
+        try {
+            Log.i(TAG, "REPO: " + FDroidApp.repo);
+            final Context context = InstrumentationRegistry.getInstrumentation().getTargetContext();
+            Preferences.setupForTests(context);
+
+            FDroidApp.initWifiSettings();
+            assertNull(FDroidApp.repo.address);
+
+            final CountDownLatch latch = new CountDownLatch(1);
+            new Thread() {
+                @Override
+                public void run() {
+                    while (FDroidApp.repo.address == null) {
+                        try {
+                            Log.i(TAG, "Waiting for IP address... " + FDroidApp.repo.address);
+                            Thread.sleep(1000);
+                        } catch (InterruptedException e) {
+                            // ignored
+                        }
+                    }
+                    latch.countDown();
+                }
+            }.start();
+            latch.await(10, TimeUnit.MINUTES);
+            assertNotNull(FDroidApp.repo.address);
+
+            LocalRepoService.runProcess(context, new String[]{context.getPackageName()});
+            Log.i(TAG, "REPO: " + FDroidApp.repo);
+            File indexJarFile = LocalRepoManager.get(context).getIndexJar();
+            assertTrue(indexJarFile.isFile());
+
+            localHttpd = new LocalHTTPD(
+                    context,
+                    null,
+                    FDroidApp.port,
+                    LocalRepoManager.get(context).getWebRoot(),
+                    false);
+            localHttpd.start();
+            Thread.sleep(100); // give the server some tine to start.
+            assertTrue(localHttpd.isAlive());
+
+            LocalRepoKeyStore localRepoKeyStore = LocalRepoKeyStore.get(context);
+            Certificate localCert = localRepoKeyStore.getCertificate();
+            String signingCert = Hasher.hex(localCert);
+            assertFalse(TextUtils.isEmpty(signingCert));
+            assertFalse(TextUtils.isEmpty(Utils.calcFingerprint(localCert)));
+
+            Repo repoToDelete = RepoProvider.Helper.findByAddress(context, FDroidApp.repo.address);
+            while (repoToDelete != null) {
+                Log.d(TAG, "Removing old test swap repo matching this one: " + repoToDelete.address);
+                RepoProvider.Helper.remove(context, repoToDelete.getId());
+                repoToDelete = RepoProvider.Helper.findByAddress(context, FDroidApp.repo.address);
+            }
+
+            ContentValues values = new ContentValues(4);
+            values.put(Schema.RepoTable.Cols.SIGNING_CERT, signingCert);
+            values.put(Schema.RepoTable.Cols.ADDRESS, FDroidApp.repo.address);
+            values.put(Schema.RepoTable.Cols.NAME, FDroidApp.repo.name);
+            values.put(Schema.RepoTable.Cols.IS_SWAP, true);
+            final String lastEtag = UUID.randomUUID().toString();
+            values.put(Schema.RepoTable.Cols.LAST_ETAG, lastEtag);
+            RepoProvider.Helper.insert(context, values);
+            Repo repo = RepoProvider.Helper.findByAddress(context, FDroidApp.repo.address);
+            assertTrue(repo.isSwap);
+            assertNotEquals(-1, repo.getId());
+            assertTrue(repo.name.startsWith(FDroidApp.repo.name));
+            assertEquals(lastEtag, repo.lastetag);
+            assertNull(repo.lastUpdated);
+
+            assertTrue(isPortInUse(FDroidApp.ipAddressString, FDroidApp.port));
+            Thread.sleep(100);
+            IndexUpdater updater = new IndexUpdater(context, repo);
+            updater.update();
+            assertTrue(updater.hasChanged());
+
+            repo = RepoProvider.Helper.findByAddress(context, FDroidApp.repo.address);
+            final Date lastUpdated = repo.lastUpdated;
+            assertTrue("repo lastUpdated should be updated", new Date(2019, 5, 13).compareTo(repo.lastUpdated) > 0);
+
+            App app = AppProvider.Helper.findSpecificApp(context.getContentResolver(),
+                    context.getPackageName(), repo.getId());
+            assertEquals(context.getPackageName(), app.packageName);
+
+            List<Apk> apks = ApkProvider.Helper.findByRepo(context, repo, Schema.ApkTable.Cols.ALL);
+            assertEquals(1, apks.size());
+            for (Apk apk : apks) {
+                Log.i(TAG, "Apk: " + apk);
+                assertEquals(context.getPackageName(), apk.packageName);
+                assertEquals(BuildConfig.VERSION_NAME, apk.versionName);
+                assertEquals(BuildConfig.VERSION_CODE, apk.versionCode);
+                assertEquals(app.repoId, apk.repoId);
+            }
+
+            Intent mainIntent = new Intent(Intent.ACTION_MAIN, null);
+            mainIntent.addCategory(Intent.CATEGORY_LAUNCHER);
+            List<ResolveInfo> resolveInfoList = context.getPackageManager().queryIntentActivities(mainIntent, 0);
+            HashSet<String> packageNames = new HashSet<>();
+            for (ResolveInfo resolveInfo : resolveInfoList) {
+                if (!isSystemPackage(resolveInfo)) {
+                    Log.i(TAG, "resolveInfo: " + resolveInfo);
+                    packageNames.add(resolveInfo.activityInfo.packageName);
+                }
+            }
+            LocalRepoService.runProcess(context, packageNames.toArray(new String[0]));
+
+            updater = new IndexUpdater(context, repo);
+            updater.update();
+            assertTrue(updater.hasChanged());
+            assertTrue("repo lastUpdated should be updated", lastUpdated.compareTo(repo.lastUpdated) < 0);
+
+            for (String packageName : packageNames) {
+                assertNotNull(ApkProvider.Helper.findByPackageName(context, packageName));
+            }
+        } finally {
+            if (localHttpd != null) {
+                localHttpd.stop();
+            }
+        }
+        if (localHttpd != null) {
+            assertFalse(localHttpd.isAlive());
+        }
+    }
+
+    private boolean isPortInUse(String host, int port) {
+        boolean result = false;
+
+        try {
+            (new Socket(host, port)).close();
+            result = true;
+        } catch (IOException e) {
+            // Could not connect.
+            e.printStackTrace();
+        }
+        return result;
+    }
+
+    private boolean isSystemPackage(ResolveInfo resolveInfo) {
+        return (resolveInfo.activityInfo.applicationInfo.flags & ApplicationInfo.FLAG_SYSTEM) != 0;
+    }
+}

app/src/androidTest/java/org/fdroid/fdroid/work/CleanCacheWorkerTest.java

@@ -0,0 +1,110 @@
+package org.fdroid.fdroid.work;
+
+import android.app.Instrumentation;
+import androidx.arch.core.executor.testing.InstantTaskExecutorRule;
+import androidx.test.filters.LargeTest;
+import androidx.test.platform.app.InstrumentationRegistry;
+import androidx.work.OneTimeWorkRequest;
+import androidx.work.WorkInfo;
+import com.google.common.util.concurrent.ListenableFuture;
+import org.apache.commons.io.FileUtils;
+import org.fdroid.fdroid.compat.FileCompatTest;
+import org.junit.Rule;
+import org.junit.Test;
+
+import java.io.File;
+import java.io.IOException;
+import java.util.concurrent.ExecutionException;
+
+import static org.junit.Assert.assertEquals;
+import static org.junit.Assert.assertFalse;
+import static org.junit.Assert.assertTrue;
+
+/**
+ * This test cannot run on Robolectric unfortunately since it does not support
+ * getting the timestamps from the files completely.
+ * <p>
+ * This is marked with {@link LargeTest} because it always fails on the emulator
+ * tests on GitLab CI.  That excludes it from the test run there.
+ */
+@LargeTest
+public class CleanCacheWorkerTest {
+    public static final String TAG = "CleanCacheWorkerEmulatorTest";
+
+    @Rule
+    public InstantTaskExecutorRule instantTaskExecutorRule = new InstantTaskExecutorRule();
+
+    @Rule
+    public WorkManagerTestRule workManagerTestRule = new WorkManagerTestRule();
+
+    @Test
+    public void testWorkRequest() throws ExecutionException, InterruptedException {
+        OneTimeWorkRequest request = new OneTimeWorkRequest.Builder(CleanCacheWorker.class).build();
+        workManagerTestRule.workManager.enqueue(request).getResult();
+        ListenableFuture<WorkInfo> workInfo = workManagerTestRule.workManager.getWorkInfoById(request.getId());
+        assertEquals(WorkInfo.State.SUCCEEDED, workInfo.get().getState());
+    }
+
+    @Test
+    public void testClearOldFiles() throws IOException, InterruptedException {
+        Instrumentation instrumentation = InstrumentationRegistry.getInstrumentation();
+        File tempDir = FileCompatTest.getWriteableDir(instrumentation);
+        assertTrue(tempDir.isDirectory());
+        assertTrue(tempDir.canWrite());
+
+        File dir = new File(tempDir, "F-Droid-test.clearOldFiles");
+        FileUtils.deleteQuietly(dir);
+        assertTrue(dir.mkdirs());
+        assertTrue(dir.isDirectory());
+
+        File first = new File(dir, "first");
+        first.deleteOnExit();
+
+        File second = new File(dir, "second");
+        second.deleteOnExit();
+
+        assertFalse(first.exists());
+        assertFalse(second.exists());
+
+        assertTrue(first.createNewFile());
+        assertTrue(first.exists());
+
+        Thread.sleep(7000);
+        assertTrue(second.createNewFile());
+        assertTrue(second.exists());
+
+        CleanCacheWorker.clearOldFiles(dir, 3000); // check all in dir
+        assertFalse(first.exists());
+        assertTrue(second.exists());
+
+        Thread.sleep(7000);
+        CleanCacheWorker.clearOldFiles(second, 3000); // check just second file
+        assertFalse(first.exists());
+        assertFalse(second.exists());
+
+        // make sure it doesn't freak out on a non-existent file
+        File nonexistent = new File(tempDir, "nonexistent");
+        CleanCacheWorker.clearOldFiles(nonexistent, 1);
+        CleanCacheWorker.clearOldFiles(null, 1);
+    }
+
+    /*
+    // TODO enable this once getImageCacheDir() can be mocked or provide a writable dir in the test
+    @Test
+    public void testDeleteOldIcons() throws IOException {
+        Context context = InstrumentationRegistry.getInstrumentation().getContext();
+        File imageCacheDir = Utils.getImageCacheDir(context);
+        imageCacheDir.mkdirs();
+        assertTrue(imageCacheDir.isDirectory());
+        File oldIcon = new File(imageCacheDir, "old.png");
+        assertTrue(oldIcon.createNewFile());
+        Assume.assumeTrue("test environment must be able to set LastModified time",
+                oldIcon.setLastModified(System.currentTimeMillis() - (DateUtils.DAY_IN_MILLIS * 370)));
+        File currentIcon = new File(imageCacheDir, "current.png");
+        assertTrue(currentIcon.createNewFile());
+        CleanCacheWorker.deleteOldIcons(context);
+        assertTrue(currentIcon.exists());
+        assertFalse(oldIcon.exists());
+    }
+     */
+}

app/src/androidTest/java/org/fdroid/fdroid/work/FDroidMetricsWorkerTest.java

@@ -0,0 +1,72 @@
+/*
+ * Copyright (C) 2021  Hans-Christoph Steiner <hans@eds.org>
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA.
+ */
+
+package org.fdroid.fdroid.work;
+
+import androidx.arch.core.executor.testing.InstantTaskExecutorRule;
+import androidx.test.filters.LargeTest;
+import androidx.test.platform.app.InstrumentationRegistry;
+import androidx.work.OneTimeWorkRequest;
+import androidx.work.WorkInfo;
+import com.google.common.util.concurrent.ListenableFuture;
+import org.junit.Ignore;
+import org.junit.Rule;
+import org.junit.Test;
+
+import java.io.IOException;
+import java.util.concurrent.ExecutionException;
+
+import static org.junit.Assert.assertEquals;
+
+/**
+ * This actually runs {@link FDroidMetricsWorker} on a device/emulator and
+ * submits a report to https://metrics.cleaninsights.org
+ * <p>
+ * This is marked with {@link LargeTest} to exclude it from running on GitLab CI
+ * because it always fails on the emulator tests there.  Also, it actually submits
+ * a report.
+ */
+@LargeTest
+public class FDroidMetricsWorkerTest {
+    public static final String TAG = "FDroidMetricsWorkerTest";
+
+    @Rule
+    public InstantTaskExecutorRule instantTaskExecutorRule = new InstantTaskExecutorRule();
+
+    @Rule
+    public WorkManagerTestRule workManagerTestRule = new WorkManagerTestRule();
+
+    /**
+     * A test for easy manual testing.
+     */
+    @Ignore
+    @Test
+    public void testGenerateReport() throws IOException {
+        String json = FDroidMetricsWorker.generateReport(
+                InstrumentationRegistry.getInstrumentation().getTargetContext());
+        System.out.println(json);
+    }
+
+    @Test
+    public void testWorkRequest() throws ExecutionException, InterruptedException {
+        OneTimeWorkRequest request = new OneTimeWorkRequest.Builder(FDroidMetricsWorker.class).build();
+        workManagerTestRule.workManager.enqueue(request).getResult();
+        ListenableFuture<WorkInfo> workInfo = workManagerTestRule.workManager.getWorkInfoById(request.getId());
+        assertEquals(WorkInfo.State.SUCCEEDED, workInfo.get().getState());
+    }
+}

app/src/androidTest/java/org/fdroid/fdroid/work/WorkManagerTestRule.java

@@ -0,0 +1,33 @@
+package org.fdroid.fdroid.work;
+
+import android.app.Instrumentation;
+import android.content.Context;
+import android.util.Log;
+import androidx.test.platform.app.InstrumentationRegistry;
+import androidx.work.Configuration;
+import androidx.work.WorkManager;
+import androidx.work.testing.SynchronousExecutor;
+import androidx.work.testing.WorkManagerTestInitHelper;
+import org.junit.rules.TestWatcher;
+import org.junit.runner.Description;
+
+public class WorkManagerTestRule extends TestWatcher {
+    Context targetContext;
+    Context testContext;
+    Configuration configuration;
+    WorkManager workManager;
+
+    @Override
+    protected void starting(Description description) {
+        final Instrumentation instrumentation = InstrumentationRegistry.getInstrumentation();
+        targetContext = instrumentation.getTargetContext();
+        testContext = instrumentation.getContext();
+        configuration = new Configuration.Builder()
+                .setMinimumLoggingLevel(Log.DEBUG)
+                .setExecutor(new SynchronousExecutor())
+                .build();
+
+        WorkManagerTestInitHelper.initializeTestWorkManager(targetContext, configuration);
+        workManager = WorkManager.getInstance(targetContext);
+    }
+}

app/src/androidTest/proguard-rules.pro

@@ -0,0 +1,25 @@
+-dontoptimize
+-dontwarn
+-dontobfuscate
+
+-dontwarn android.test.**
+-dontwarn android.support.test.**
+-dontnote junit.framework.**
+-dontnote junit.runner.**
+
+# Uncomment this if you use Mockito
+#-dontwarn org.mockito.**
+
+-keep class org.hamcrest.** { *; }
+-dontwarn org.hamcrest.**
+
+-keep class org.junit.** { *; }
+-dontwarn org.junit.**
+
+-keep class junit.** { *; }
+-dontwarn junit.**
+
+# This is necessary so that RemoteWorkManager can be initialized (also marked with @Keep)
+-keep class androidx.work.multiprocess.RemoteWorkManagerClient {
+    public <init>(...);
+}

app/src/basic/java/org/fdroid/fdroid/nearby/BluetoothClient.java

@@ -0,0 +1,34 @@
+/*
+ * Copyright (C) 2018 Senecto Limited
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
+ * MA 02110-1301, USA.
+ */
+
+package org.fdroid.fdroid.nearby;
+
+/**
+ * Dummy version for basic app flavor.
+ */
+
+public class BluetoothClient {
+
+    public BluetoothClient(String ignored) {
+    }
+
+    public BluetoothConnection openConnection() {
+        return null;
+    }
+}

app/src/basic/java/org/fdroid/fdroid/nearby/LocalRepoManager.java

@@ -0,0 +1,5 @@
+package org.fdroid.fdroid.nearby;
+
+public class LocalRepoManager {
+    public static final String[] WEB_ROOT_ASSET_FILES = {};
+}

app/src/basic/java/org/fdroid/fdroid/nearby/SDCardScannerService.java

@@ -0,0 +1,30 @@
+/*
+ * Copyright (C) 2018 Hans-Christoph Steiner <hans@eds.org>
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
+ * MA 02110-1301, USA.
+ */
+
+package org.fdroid.fdroid.nearby;
+
+import android.content.Context;
+
+/**
+ * Dummy version for basic app flavor.
+ */
+public class SDCardScannerService {
+    public static void scan(Context context) {
+    }
+}

app/src/basic/java/org/fdroid/fdroid/nearby/SwapService.java

@@ -0,0 +1,30 @@
+/*
+ * Copyright (C) 2018 Hans-Christoph Steiner <hans@eds.org>
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
+ * MA 02110-1301, USA.
+ */
+
+package org.fdroid.fdroid.nearby;
+
+import android.content.Context;
+
+/**
+ * Dummy version for basic app flavor.
+ */
+public class SwapService {
+    public static void start(Context context) {
+    }
+}

app/src/basic/java/org/fdroid/fdroid/nearby/SwapWorkflowActivity.java

@@ -0,0 +1,34 @@
+/*
+ * Copyright (C) 2018 Senecto Limited
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
+ * MA 02110-1301, USA.
+ */
+
+package org.fdroid.fdroid.nearby;
+
+import android.content.Context;
+import android.net.Uri;
+
+/**
+ * Dummy version for basic app flavor.
+ */
+public class SwapWorkflowActivity {
+
+    public static final String EXTRA_PREVENT_FURTHER_SWAP_REQUESTS = "preventFurtherSwap";
+
+    public static void requestSwap(Context context, Uri uri) {
+    }
+}

app/src/basic/java/org/fdroid/fdroid/nearby/TreeUriScannerIntentService.java

@@ -0,0 +1,32 @@
+/*
+ * Copyright (C) 2018 Senecto Limited
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
+ * MA 02110-1301, USA.
+ */
+
+package org.fdroid.fdroid.nearby;
+
+import androidx.appcompat.app.AppCompatActivity;
+import android.content.Intent;
+
+/**
+ * Dummy version for basic app flavor.
+ */
+public class TreeUriScannerIntentService {
+    public static void onActivityResult(AppCompatActivity activity, Intent intent) {
+        throw new IllegalStateException("unimplemented");
+    }
+}

app/src/basic/java/org/fdroid/fdroid/nearby/WifiStateChangeService.java

@@ -1,5 +1,5 @@
 /*
- * Copyright (C) 2012  Ciaran Gultnieks, ciaran@ciarang.com
+ * Copyright (C) 2018 Senecto Limited
  *
  * This program is free software; you can redistribute it and/or
  * modify it under the terms of the GNU General Public License
@@ -13,23 +13,23 @@
  *
  * You should have received a copy of the GNU General Public License
  * along with this program; if not, write to the Free Software
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA.
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
+ * MA 02110-1301, USA.
  */
 
-package org.fdroid.fdroid;
+package org.fdroid.fdroid.nearby;
 
-import android.content.BroadcastReceiver;
 import android.content.Context;
 import android.content.Intent;
-import android.util.Log;
+import androidx.annotation.Nullable;
 
-public class PackageReceiver extends BroadcastReceiver {
-
-    @Override
-    public void onReceive(Context ctx, Intent intent) {
-        String appid = intent.getData().getSchemeSpecificPart();
-        Log.d("FDroid", "PackageReceiver received "+appid);
-        ((FDroidApp) ctx.getApplicationContext()).invalidateApp(appid);
+/**
+ * Dummy version for basic app flavor.
+ */
+public class WifiStateChangeService {
+    public static void start(Context context, @Nullable Intent intent) {
     }
 
+    public class WifiInfoThread extends Thread {
+    }
 }

app/src/basic/java/org/fdroid/fdroid/nearby/peers/WifiPeer.java

@@ -0,0 +1,30 @@
+/*
+ * Copyright (C) 2018 Senecto Limited
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
+ * MA 02110-1301, USA.
+ */
+
+package org.fdroid.fdroid.nearby.peers;
+
+import org.fdroid.fdroid.data.NewRepoConfig;
+
+/**
+ * Dummy version for basic app flavor.
+ */
+public class WifiPeer {
+    public WifiPeer(NewRepoConfig config) {
+    }
+}

app/src/basic/java/org/fdroid/fdroid/panic/HidingManager.java

@@ -0,0 +1,37 @@
+/*
+ * Copyright (C) 2018 Senecto Limited
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
+ * MA 02110-1301, USA.
+ */
+
+package org.fdroid.fdroid.panic;
+
+import android.content.Context;
+
+/**
+ * Dummy version for basic app flavor.
+ */
+public class HidingManager {
+
+    public static boolean isHidden(Context context) {
+        return false;
+    }
+
+    public static void showHideDialog(final Context context) {
+        throw new IllegalStateException("unimplemented");
+    }
+
+}

app/src/basic/java/org/fdroid/fdroid/views/main/MainViewController.java

@@ -0,0 +1,99 @@
+/*
+ * Copyright (C) 2018 Senecto Limited
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
+ * MA 02110-1301, USA.
+ */
+
+package org.fdroid.fdroid.views.main;
+
+import android.widget.FrameLayout;
+import androidx.annotation.Nullable;
+import androidx.appcompat.app.AppCompatActivity;
+import androidx.fragment.app.Fragment;
+import androidx.recyclerview.widget.RecyclerView;
+import org.fdroid.fdroid.R;
+import org.fdroid.fdroid.views.PreferencesFragment;
+import org.fdroid.fdroid.views.updates.UpdatesViewBinder;
+
+/**
+ * Decides which view on the main screen to attach to a given {@link FrameLayout}. This class
+ * doesn't know which view it will be rendering at the time it is constructed. Rather, at some
+ * point in the future the {@link MainViewAdapter} will have information about which view we
+ * are required to render, and will invoke the relevant "bind*()" method on this class.
+ */
+class MainViewController extends RecyclerView.ViewHolder {
+
+    private final AppCompatActivity activity;
+    private final FrameLayout frame;
+
+    @Nullable
+    private UpdatesViewBinder updatesView = null;
+
+    MainViewController(AppCompatActivity activity, FrameLayout frame) {
+        super(frame);
+        this.activity = activity;
+        this.frame = frame;
+    }
+
+    /**
+     * @see LatestViewBinder
+     */
+    public void bindLatestView() {
+        new LatestViewBinder(activity, frame);
+    }
+
+    /**
+     * @see UpdatesViewBinder
+     */
+    public void bindUpdates() {
+        if (updatesView == null) {
+            updatesView = new UpdatesViewBinder(activity, frame);
+        }
+
+        updatesView.bind();
+    }
+
+    public void unbindUpdates() {
+        if (updatesView != null) {
+            updatesView.unbind();
+        }
+    }
+
+    public void bindCategoriesView() {
+        throw new IllegalStateException("unimplemented");
+    }
+
+    public void bindSwapView() {
+        throw new IllegalStateException("unimplemented");
+    }
+
+    /**
+     * Attaches a {@link PreferencesFragment} to the view. Everything else is managed by the
+     * fragment itself, so no further work needs to be done by this view binder.
+     * <p>
+     * Note: It is tricky to attach a {@link Fragment} to a view from this view holder. This is due
+     * to the way in which the {@link RecyclerView} will reuse existing views and ask us to
+     * put a settings fragment in there at arbitrary times. Usually it wont be the same view we
+     * attached the fragment to last time, which causes weirdness. The solution is to use code from
+     * the com.lsjwzh.widget.recyclerviewpager.FragmentStatePagerAdapter which manages this.
+     * The code has been ported to {@link SettingsView}.
+     *
+     * @see SettingsView
+     */
+    public void bindSettingsView() {
+        activity.getLayoutInflater().inflate(R.layout.main_tab_settings, frame, true);
+    }
+}

app/src/basic/java/org/fdroid/fdroid/views/main/NearbyViewBinder.java

@@ -0,0 +1,9 @@
+package org.fdroid.fdroid.views.main;
+
+import android.content.Context;
+
+class NearbyViewBinder {
+    public static void updateUsbOtg(Context context) {
+        throw new IllegalStateException("unimplemented");
+    }
+}

app/src/basic/res/menu/main_activity_screens.xml

@@ -0,0 +1,16 @@
+<?xml version="1.0" encoding="utf-8"?>
+<menu xmlns:android="http://schemas.android.com/apk/res/android"
+      xmlns:app="http://schemas.android.com/apk/res-auto"
+      xmlns:tools="http://schemas.android.com/tools"
+      tools:ignore="MenuTitle">
+    <!-- android:title and android:icon are set dynamically in MainActivity -->
+    <item
+            app:showAsAction="ifRoom|withText"
+            android:id="@+id/latest"/>
+    <item
+            app:showAsAction="ifRoom|withText"
+            android:id="@+id/updates"/>
+    <item
+            app:showAsAction="ifRoom|withText"
+            android:id="@+id/settings"/>
+</menu>

app/src/basic/res/values/strings.xml

@@ -0,0 +1,5 @@
+<?xml version="1.0" encoding="utf-8"?>
+<resources>
+    <string name="app_name">F-Droid Basic</string>
+    <string name="about_title">About F-Droid Basic</string>
+</resources>

app/src/basic/res/xml/preferences.xml

@@ -0,0 +1,183 @@
+<?xml version="1.0" encoding="utf-8"?>
+<PreferenceScreen xmlns:android="http://schemas.android.com/apk/res/android">
+
+    <PreferenceScreen android:title="@string/about_title"
+        android:key="pref_about" />
+
+    <PreferenceCategory android:title="@string/preference_category__my_apps">
+        <PreferenceScreen android:title="@string/preference_manage_installed_apps">
+            <intent
+                    android:action="android.intent.action.MAIN"
+                    android:targetPackage="@string/applicationId"
+                    android:targetClass="org.fdroid.fdroid.views.installed.InstalledAppsActivity"/>
+        </PreferenceScreen>
+        <PreferenceScreen
+                android:title="@string/menu_manage"
+                android:summary="@string/repositories_summary">
+            <intent
+                    android:action="android.intent.action.MAIN"
+                    android:targetPackage="@string/applicationId"
+                    android:targetClass="org.fdroid.fdroid.views.ManageReposActivity"/>
+        </PreferenceScreen>
+        <PreferenceScreen
+                android:key="installHistory"
+                android:visible="false"
+                android:title="@string/install_history"
+                android:summary="@string/install_history_summary">
+            <intent
+                    android:action="android.intent.action.MAIN"
+                    android:targetPackage="@string/applicationId"
+                    android:targetClass="org.fdroid.fdroid.views.InstallHistoryActivity"/>
+        </PreferenceScreen>
+    </PreferenceCategory>
+
+    <PreferenceCategory android:title="@string/updates">
+        <org.fdroid.fdroid.views.LiveSeekBarPreference
+                android:key="overWifi"
+                android:title="@string/over_wifi"
+                android:defaultValue="@integer/defaultOverWifi"
+                android:layout="@layout/preference_seekbar"/>
+        <org.fdroid.fdroid.views.LiveSeekBarPreference
+                android:key="overData"
+                android:title="@string/over_data"
+                android:defaultValue="@integer/defaultOverData"
+                android:layout="@layout/preference_seekbar"/>
+        <SwitchPreferenceCompat
+                android:title="@string/update_auto_download"
+                android:summary="@string/update_auto_download_summary"
+                android:key="updateAutoDownload"/>
+        <org.fdroid.fdroid.views.LiveSeekBarPreference
+                android:key="updateIntervalSeekBarPosition"
+                android:title="@string/update_interval"
+                android:defaultValue="@integer/defaultUpdateInterval"
+                android:layout="@layout/preference_seekbar"/>
+        <SwitchPreferenceCompat
+                android:title="@string/notify"
+                android:defaultValue="true"
+                android:key="updateNotify"/>
+    </PreferenceCategory>
+
+    <PreferenceCategory android:title="@string/display"
+                                                      android:key="pref_category_display">
+        <ListPreference
+                android:title="@string/pref_language"
+                android:key="language"/>
+        <ListPreference
+                android:title="@string/theme"
+                android:key="theme"
+                android:defaultValue="light"
+                android:entries="@array/themeNames"
+                android:entryValues="@array/themeValues"/>
+    </PreferenceCategory>
+
+    <PreferenceCategory android:title="@string/appcompatibility"
+                                                      android:key="pref_category_appcompatibility">
+        <SwitchPreferenceCompat
+                android:title="@string/show_incompat_versions"
+                android:defaultValue="false"
+                android:key="incompatibleVersions"/>
+        <SwitchPreferenceCompat
+                android:title="@string/show_anti_feature_apps"
+                android:defaultValue="false"
+                android:key="showAntiFeatureApps"/>
+        <SwitchPreferenceCompat
+                android:title="@string/force_touch_apps"
+                android:defaultValue="false"
+                android:key="ignoreTouchscreen"/>
+    </PreferenceCategory>
+
+    <PreferenceCategory android:title="@string/proxy">
+        <SwitchPreferenceCompat
+                android:key="useTor"
+                android:summary="@string/useTorSummary"
+                android:title="@string/useTor"/>
+        <SwitchPreferenceCompat
+                android:defaultValue="false"
+                android:key="enableProxy"
+                android:title="@string/enable_proxy_title"
+                android:summary="@string/enable_proxy_summary"/>
+        <EditTextPreference
+                android:key="proxyHost"
+                android:title="@string/proxy_host"
+                android:summary="@string/proxy_host_summary"
+                android:dependency="enableProxy"/>
+        <EditTextPreference
+                android:key="proxyPort"
+                android:title="@string/proxy_port"
+                android:summary="@string/proxy_port_summary"
+                android:dependency="enableProxy"/>
+    </PreferenceCategory>
+
+    <PreferenceCategory
+            android:key="pref_category_privacy"
+            android:title="@string/privacy">
+        <SwitchPreferenceCompat
+                android:key="promptToSendCrashReports"
+                android:title="@string/prompt_to_send_crash_reports"
+                android:summary="@string/prompt_to_send_crash_reports_summary"
+                android:defaultValue="true"/>
+        <SwitchPreferenceCompat
+                android:defaultValue="false"
+                android:key="preventScreenshots"
+                android:summary="@string/preventScreenshots_summary"
+                android:title="@string/preventScreenshots_title"/>
+    </PreferenceCategory>
+
+    <PreferenceCategory
+            android:title="@string/other"
+            android:key="pref_category_other">
+        <ListPreference
+                android:title="@string/cache_downloaded"
+                android:key="keepCacheFor"
+                android:defaultValue="86400000"
+                android:entries="@array/keepCacheNames"
+                android:entryValues="@array/keepCacheValues"/>
+        <SwitchPreferenceCompat
+                android:title="@string/expert"
+                android:defaultValue="false"
+                android:key="expert"/>
+        <CheckBoxPreference
+                android:key="unstableUpdates"
+                android:title="@string/unstable_updates"
+                android:summary="@string/unstable_updates_summary"
+                android:defaultValue="false"
+                android:dependency="expert"/>
+        <CheckBoxPreference
+                android:key="keepInstallHistory"
+                android:title="@string/keep_install_history"
+                android:summary="@string/keep_install_history_summary"
+                android:defaultValue="false"
+                android:dependency="expert"/>
+        <CheckBoxPreference
+                android:key="sendToFdroidMetrics"
+                android:title="@string/send_to_fdroid_metrics"
+                android:summary="@string/send_to_fdroid_metrics_summary"
+                android:defaultValue="false"
+                android:dependency="expert"/>
+        <CheckBoxPreference
+                android:key="hideAllNotifications"
+                android:title="@string/hide_all_notifications"
+                android:summary="@string/hide_all_notifications_summary"
+                android:defaultValue="false"
+                android:dependency="expert"/>
+        <CheckBoxPreference
+                android:key="sendVersionAndUUIDToServers"
+                android:title="@string/send_version_and_uuid"
+                android:summary="@string/send_version_and_uuid_summary"
+                android:defaultValue="false"
+                android:dependency="expert"/>
+        <CheckBoxPreference
+                android:key="forceOldIndex"
+                android:title="@string/force_old_index"
+                android:summary="@string/force_old_index_summary"
+                android:defaultValue="false"
+                android:dependency="expert"/>
+        <CheckBoxPreference
+                android:title="@string/system_installer"
+                android:defaultValue="false"
+                android:key="privilegedInstaller"
+                android:persistent="false"
+                android:dependency="expert"/>
+    </PreferenceCategory>
+
+</PreferenceScreen>

app/src/debug/AndroidManifest.xml

@@ -0,0 +1,8 @@
+<?xml version="1.0" encoding="utf-8"?>
+
+<!-- This file should be outside of release manifest (in this case app/src/mock/Manifest.xml -->
+<manifest xmlns:android="http://schemas.android.com/apk/res/android">
+
+    <!--required to enable/disable system animations from the app itself during Espresso test runs-->
+    <uses-permission android:name="android.permission.SET_ANIMATION_SCALE" />
+</manifest>

app/src/full/AndroidManifest.xml

@@ -0,0 +1,179 @@
+<?xml version="1.0" encoding="utf-8"?>
+
+<!--
+ * Copyright (C) 2010-2012 Ciaran Gultnieks
+ * Copyright (C) 2013-2017 Peter Serwylo
+ * Copyright (C) 2014-2015 Daniel Martí
+ * Copyright (C) 2014-2018 Hans-Christoph Steiner
+ * Copyright (C) 2016 Dominik Schürmann
+ * Copyright (C) 2018 Torsten Grote
+ * Copyright (C) 2018 Senecto Limited
+ *
+ * This program is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation; either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program; if not, write to the Free Software
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA.
+-->
+<manifest xmlns:android="http://schemas.android.com/apk/res/android"
+    package="org.fdroid.fdroid"
+    android:installLocation="auto">
+
+    <uses-feature
+        android:name="android.hardware.nfc"
+        android:required="false" />
+    <uses-feature
+        android:name="android.hardware.bluetooth"
+        android:required="false" />
+
+    <uses-feature
+        android:name="android.hardware.usb.host"
+        android:required="false" />
+
+    <uses-permission android:name="android.permission.INTERNET" />
+    <uses-permission android:name="android.permission.ACCESS_NETWORK_STATE" />
+    <uses-permission android:name="android.permission.ACCESS_WIFI_STATE" />
+    <uses-permission android:name="android.permission.CHANGE_WIFI_MULTICAST_STATE" />
+    <uses-permission android:name="android.permission.CHANGE_NETWORK_STATE" />
+    <uses-permission android:name="android.permission.CHANGE_WIFI_STATE" />
+    <uses-permission android:name="android.permission.BLUETOOTH" />
+    <uses-permission android:name="android.permission.BLUETOOTH_ADMIN" />
+    <uses-permission android:name="android.permission.RECEIVE_BOOT_COMPLETED" />
+    <uses-permission android:name="android.permission.READ_EXTERNAL_STORAGE" />
+    <uses-permission android:name="android.permission.WRITE_EXTERNAL_STORAGE" />
+    <uses-permission android:name="android.permission.WRITE_SETTINGS" />
+    <uses-permission android:name="android.permission.NFC" />
+    <uses-permission
+        android:name="android.permission.USB_PERMISSION"
+        android:maxSdkVersion="22" /><!-- maybe unnecessary -->
+
+    <uses-permission android:name="android.permission.WAKE_LOCK" />
+
+    <uses-permission-sdk-23 android:name="android.permission.ACCESS_COARSE_LOCATION" />
+
+    <application>
+
+        <activity
+            android:name=".nearby.SwapWorkflowActivity"
+            android:configChanges="orientation|keyboardHidden"
+            android:label="@string/swap"
+            android:launchMode="singleTask"
+            android:parentActivityName=".views.main.MainActivity"
+            android:screenOrientation="portrait">
+            <meta-data
+                android:name="android.support.PARENT_ACTIVITY"
+                android:value=".views.main.MainActivity" />
+        </activity>
+
+        <activity
+            android:name=".panic.PanicPreferencesActivity"
+            android:label="@string/panic_settings"
+            android:parentActivityName=".views.main.MainActivity">
+            <intent-filter>
+                <action android:name="info.guardianproject.panic.action.CONNECT" />
+                <action android:name="info.guardianproject.panic.action.DISCONNECT" />
+
+                <category android:name="android.intent.category.DEFAULT" />
+            </intent-filter>
+
+            <meta-data
+                android:name="android.support.PARENT_ACTIVITY"
+                android:value=".views.main.MainActivity" />
+        </activity>
+
+        <activity
+            android:name=".panic.SelectInstalledAppsActivity"
+            android:parentActivityName=".panic.PanicPreferencesActivity" />
+
+        <activity
+            android:name=".panic.PanicResponderActivity"
+            android:noHistory="true"
+            android:theme="@android:style/Theme.NoDisplay">
+
+            <!-- this can never have launchMode singleTask or singleInstance! -->
+            <intent-filter>
+                <action android:name="info.guardianproject.panic.action.TRIGGER" />
+
+                <category android:name="android.intent.category.DEFAULT" />
+            </intent-filter>
+        </activity>
+        <activity
+            android:name=".panic.ExitActivity"
+            android:theme="@android:style/Theme.NoDisplay" />
+
+        <activity
+            android:name=".panic.CalculatorActivity"
+            android:enabled="false"
+            android:icon="@mipmap/ic_calculator_launcher"
+            android:label="@string/hiding_calculator">
+            <intent-filter>
+                <action android:name="android.intent.action.MAIN" />
+
+                <category android:name="android.intent.category.LAUNCHER" />
+            </intent-filter>
+        </activity>
+        <receiver android:name=".nearby.WifiStateChangeReceiver">
+            <intent-filter>
+                <action android:name="android.net.wifi.STATE_CHANGE" />
+            </intent-filter>
+        </receiver>
+        <receiver android:name=".receiver.DeviceStorageReceiver">
+            <intent-filter>
+                <action android:name="android.intent.action.DEVICE_STORAGE_LOW" />
+            </intent-filter>
+        </receiver>
+
+        <receiver android:name=".nearby.UsbDeviceAttachedReceiver">
+            <intent-filter>
+                <action android:name="android.hardware.usb.action.USB_DEVICE_ATTACHED" />
+            </intent-filter>
+            <meta-data
+                android:name="android.hardware.usb.action.USB_DEVICE_ATTACHED"
+                android:resource="@xml/device_filter" />
+        </receiver>
+        <receiver android:name=".nearby.UsbDeviceDetachedReceiver">
+            <intent-filter>
+                <action android:name="android.hardware.usb.action.USB_DEVICE_DETACHED" />
+            </intent-filter>
+            <meta-data
+                android:name="android.hardware.usb.action.USB_DEVICE_DETACHED"
+                android:resource="@xml/device_filter" />
+        </receiver>
+        <receiver android:name=".nearby.UsbDeviceMediaMountedReceiver">
+            <intent-filter>
+                <action android:name="android.intent.action.MEDIA_EJECT" />
+                <action android:name="android.intent.action.MEDIA_REMOVED" />
+                <action android:name="android.intent.action.MEDIA_MOUNTED" />
+                <action android:name="android.intent.action.MEDIA_BAD_REMOVAL" />
+
+                <data android:scheme="content" />
+                <data android:scheme="file" />
+            </intent-filter>
+        </receiver>
+
+        <service
+            android:name=".nearby.WifiStateChangeService"
+            android:exported="false" />
+        <service android:name=".nearby.SwapService" />
+
+        <service
+            android:name=".nearby.LocalRepoService"
+            android:exported="false" />
+        <service
+            android:name=".nearby.TreeUriScannerIntentService"
+            android:exported="false" />
+        <service
+            android:name=".nearby.SDCardScannerService"
+            android:exported="false" />
+
+    </application>
+
+</manifest>

app/src/full/java/javax/jmdns/impl/FDroidServiceInfo.java

@@ -0,0 +1,123 @@
+package javax.jmdns.impl;
+
+import android.os.Parcel;
+import android.os.Parcelable;
+import android.text.TextUtils;
+
+import java.net.Inet4Address;
+import java.net.Inet6Address;
+import java.net.UnknownHostException;
+
+import javax.jmdns.ServiceInfo;
+import javax.jmdns.impl.util.ByteWrangler;
+
+/**
+ * The ServiceInfo class needs to be serialized in order to be sent as an Android broadcast.
+ * In order to make it Parcelable (or Serializable for that matter), there are some package-scope
+ * methods which needed to be used. Thus, this class is in the javax.jmdns.impl package so that
+ * it can access those methods. This is as an alternative to modifying the source code of JmDNS.
+ */
+public class FDroidServiceInfo extends ServiceInfoImpl implements Parcelable {
+
+    public FDroidServiceInfo(ServiceInfo info) {
+        super(info);
+    }
+
+    /**
+     * Return the fingerprint of the signing key, or {@code null} if it is not set.
+     */
+    public String getFingerprint() {
+        // getPropertyString() will return "true" if the value is a zero-length byte array
+        // so we just do a custom version using getPropertyBytes()
+        byte[] data = getPropertyBytes("fingerprint");
+        if (data == null || data.length == 0) {
+            return null;
+        }
+        String fingerprint = ByteWrangler.readUTF(data, 0, data.length);
+        if (TextUtils.isEmpty(fingerprint)) {
+            return null;
+        }
+        return fingerprint;
+    }
+
+    public String getRepoAddress() {
+        return getURL(); // Automatically appends the "path" property if present, so no need to do it ourselves.
+    }
+
+    private static byte[] readBytes(Parcel in) {
+        byte[] bytes = new byte[in.readInt()];
+        in.readByteArray(bytes);
+        return bytes;
+    }
+
+    public FDroidServiceInfo(Parcel in) {
+        super(
+                in.readString(),
+                in.readString(),
+                in.readString(),
+                in.readInt(),
+                in.readInt(),
+                in.readInt(),
+                in.readByte() != 0,
+                readBytes(in)
+        );
+
+        int addressCount = in.readInt();
+        for (int i = 0; i < addressCount; i++) {
+            try {
+                addAddress((Inet4Address) Inet4Address.getByAddress(readBytes(in)));
+            } catch (UnknownHostException e) {
+                e.printStackTrace();
+            }
+        }
+
+        addressCount = in.readInt();
+        for (int i = 0; i < addressCount; i++) {
+            try {
+                addAddress((Inet6Address) Inet6Address.getByAddress(readBytes(in)));
+            } catch (UnknownHostException e) {
+                e.printStackTrace();
+            }
+        }
+    }
+
+    @Override
+    public int describeContents() {
+        return 0;
+    }
+
+    @Override
+    public void writeToParcel(Parcel dest, int flags) {
+        dest.writeString(getType());
+        dest.writeString(getName());
+        dest.writeString(getSubtype());
+        dest.writeInt(getPort());
+        dest.writeInt(getWeight());
+        dest.writeInt(getPriority());
+        dest.writeByte(isPersistent() ? (byte) 1 : (byte) 0);
+        dest.writeInt(getTextBytes().length);
+        dest.writeByteArray(getTextBytes());
+        dest.writeInt(getInet4Addresses().length);
+        for (int i = 0; i < getInet4Addresses().length; i++) {
+            Inet4Address address = getInet4Addresses()[i];
+            dest.writeInt(address.getAddress().length);
+            dest.writeByteArray(address.getAddress());
+        }
+        dest.writeInt(getInet6Addresses().length);
+        for (int i = 0; i < getInet6Addresses().length; i++) {
+            Inet6Address address = getInet6Addresses()[i];
+            dest.writeInt(address.getAddress().length);
+            dest.writeByteArray(address.getAddress());
+        }
+    }
+
+    public static final Parcelable.Creator<FDroidServiceInfo> CREATOR = new Parcelable.Creator<FDroidServiceInfo>() {
+        public FDroidServiceInfo createFromParcel(Parcel source) {
+            return new FDroidServiceInfo(source);
+        }
+
+        public FDroidServiceInfo[] newArray(int size) {
+            return new FDroidServiceInfo[size];
+        }
+    };
+}

app/src/full/java/kellinwood/logging/AbstractLogger.java

@@ -0,0 +1,94 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.logging;
+
+import java.text.SimpleDateFormat;
+import java.util.Date;
+import java.util.Locale;
+
+public abstract class AbstractLogger implements LoggerInterface {
+
+    protected String category;
+
+    SimpleDateFormat dateFormat = new SimpleDateFormat("yyyy-MM-dd hh:mm:ss", Locale.ENGLISH);
+
+    public AbstractLogger(String category) {
+        this.category = category;
+    }
+
+    protected String format(String level, String message) {
+        return String.format("%s %s %s: %s\n", dateFormat.format(new Date()), level, category, message);
+    }
+
+    protected abstract void write(String level, String message, Throwable t);
+
+    protected void writeFixNullMessage(String level, String message, Throwable t) {
+        if (message == null) {
+            if (t != null) message = t.getClass().getName();
+            else message = "null";
+        }
+        write(level, message, t);
+    }
+
+    public void debug(String message, Throwable t) {
+        writeFixNullMessage(DEBUG, message, t);
+    }
+
+    public void debug(String message) {
+        writeFixNullMessage(DEBUG, message, null);
+    }
+
+    public void error(String message, Throwable t) {
+        writeFixNullMessage(ERROR, message, t);
+    }
+
+    public void error(String message) {
+        writeFixNullMessage(ERROR, message, null);
+    }
+
+    public void info(String message, Throwable t) {
+        writeFixNullMessage(INFO, message, t);
+    }
+
+    public void info(String message) {
+        writeFixNullMessage(INFO, message, null);
+    }
+
+    public void warning(String message, Throwable t) {
+        writeFixNullMessage(WARNING, message, t);
+    }
+
+    public void warning(String message) {
+        writeFixNullMessage(WARNING, message, null);
+    }
+
+    public boolean isDebugEnabled() {
+        return true;
+    }
+
+    public boolean isErrorEnabled() {
+        return true;
+    }
+
+    public boolean isInfoEnabled() {
+        return true;
+    }
+
+    public boolean isWarningEnabled() {
+        return true;
+    }
+}

app/src/full/java/kellinwood/logging/ConsoleLoggerFactory.java

@@ -0,0 +1,24 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.logging;
+
+public class ConsoleLoggerFactory implements LoggerFactory {
+
+    public LoggerInterface getLogger(String category) {
+        return new StreamLogger(category, System.out);
+    }
+}

app/src/full/java/kellinwood/logging/LoggerFactory.java

@@ -0,0 +1,22 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.logging;
+
+public interface LoggerFactory {
+
+    public LoggerInterface getLogger(String category);
+}

app/src/full/java/kellinwood/logging/LoggerInterface.java

@@ -0,0 +1,52 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.logging;
+
+public interface LoggerInterface {
+
+    public static final String ERROR = "ERROR";
+    public static final String WARNING = "WARNING";
+    public static final String INFO = "INFO";
+    public static final String DEBUG = "DEBUG";
+
+    public boolean isErrorEnabled();
+
+    public void error(String message);
+
+    public void error(String message, Throwable t);
+
+
+    public boolean isWarningEnabled();
+
+    public void warning(String message);
+
+    public void warning(String message, Throwable t);
+
+    public boolean isInfoEnabled();
+
+    public void info(String message);
+
+    public void info(String message, Throwable t);
+
+    public boolean isDebugEnabled();
+
+    public void debug(String message);
+
+    public void debug(String message, Throwable t);
+
+
+}

app/src/full/java/kellinwood/logging/LoggerManager.java

@@ -0,0 +1,41 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.logging;
+
+import java.util.Map;
+import java.util.TreeMap;
+
+public class LoggerManager {
+
+    static LoggerFactory factory = new NullLoggerFactory();
+
+    static Map<String, LoggerInterface> loggers = new TreeMap<String, LoggerInterface>();
+
+    public static void setLoggerFactory(LoggerFactory f) {
+        factory = f;
+    }
+
+    public static LoggerInterface getLogger(String category) {
+
+        LoggerInterface logger = loggers.get(category);
+        if (logger == null) {
+            logger = factory.getLogger(category);
+            loggers.put(category, logger);
+        }
+        return logger;
+    }
+}

app/src/full/java/kellinwood/logging/NullLoggerFactory.java

@@ -0,0 +1,70 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.logging;
+
+public class NullLoggerFactory implements LoggerFactory {
+
+    static LoggerInterface logger = new LoggerInterface() {
+
+        public void debug(String message) {
+        }
+
+        public void debug(String message, Throwable t) {
+        }
+
+        public void error(String message) {
+        }
+
+        public void error(String message, Throwable t) {
+        }
+
+        public void info(String message) {
+        }
+
+        public void info(String message, Throwable t) {
+        }
+
+        public boolean isDebugEnabled() {
+            return false;
+        }
+
+        public boolean isErrorEnabled() {
+            return false;
+        }
+
+        public boolean isInfoEnabled() {
+            return false;
+        }
+
+        public boolean isWarningEnabled() {
+            return false;
+        }
+
+        public void warning(String message) {
+        }
+
+        public void warning(String message, Throwable t) {
+        }
+
+    };
+
+
+    public LoggerInterface getLogger(String category) {
+        return logger;
+    }
+
+}

app/src/full/java/kellinwood/logging/StreamLogger.java

@@ -0,0 +1,36 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.logging;
+
+import java.io.PrintStream;
+
+public class StreamLogger extends AbstractLogger {
+
+    PrintStream out;
+
+    public StreamLogger(String category, PrintStream out) {
+        super(category);
+        this.out = out;
+    }
+
+    @Override
+    protected void write(String level, String message, Throwable t) {
+        out.print(format(level, message));
+        if (t != null) t.printStackTrace(out);
+    }
+
+}

app/src/full/java/kellinwood/security/zipsigner/AutoKeyException.java

@@ -0,0 +1,15 @@
+
+package kellinwood.security.zipsigner;
+
+public class AutoKeyException extends RuntimeException {
+
+    private static final long serialVersionUID = 1L;
+
+    public AutoKeyException(String message) {
+        super(message);
+    }
+
+    public AutoKeyException(String message, Throwable cause) {
+        super(message, cause);
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/Base64.java

@@ -0,0 +1,130 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+
+
+package kellinwood.security.zipsigner;
+
+import kellinwood.logging.LoggerInterface;
+import kellinwood.logging.LoggerManager;
+
+import java.io.ByteArrayOutputStream;
+import java.io.OutputStream;
+import java.lang.reflect.Method;
+
+/*
+ * This class provides Base64 encoding services using one of several possible 
+ * implementations available elsewhere in the classpath. Supported implementations 
+ * are android.util.Base64 and org.bouncycastle.util.encoders.Base64Encoder.  
+ * These APIs are accessed via reflection, and as long as at least one is available
+ * Base64 encoding is possible.  This technique provides compatibility across different
+ * Android OS versions, and also allows zipsigner-lib to operate in desktop environments
+ * as long as the BouncyCastle provider jar is in the classpath.
+ * 
+ * android.util.Base64 was added in API level 8 (Android 2.2, Froyo)
+ * org.bouncycastle.util.encoders.Base64Encoder was removed in API level 11 (Android 3.0, Honeycomb)
+ * 
+ */
+@SuppressWarnings("unchecked")
+public class Base64 {
+
+    static Method aEncodeMethod = null;  // Reference to the android.util.Base64.encode() method, if available
+    static Method aDecodeMethod = null;  // Reference to the android.util.Base64.decode() method, if available
+
+    static Object bEncoder = null; // Reference to an org.bouncycastle.util.encoders.Base64Encoder instance, if available
+    static Method bEncodeMethod = null;  // Reference to the bEncoder.encode() method, if available
+
+    static Object bDecoder = null; // Reference to an org.bouncycastle.util.encoders.Base64Encoder instance, if available
+    static Method bDecodeMethod = null;  // Reference to the bEncoder.encode() method, if available    
+
+    static LoggerInterface logger = null;
+
+    static {
+
+        Class<Object> clazz;
+
+        logger = LoggerManager.getLogger(Base64.class.getName());
+
+        try {
+            clazz = (Class<Object>) Class.forName("android.util.Base64");
+            // Looking for encode( byte[] input, int flags)
+            aEncodeMethod = clazz.getMethod("encode", byte[].class, Integer.TYPE);
+            aDecodeMethod = clazz.getMethod("decode", byte[].class, Integer.TYPE);
+            logger.info(clazz.getName() + " is available.");
+        } catch (ClassNotFoundException x) {
+        } // Ignore
+        catch (Exception x) {
+            logger.error("Failed to initialize use of android.util.Base64", x);
+        }
+
+        try {
+            clazz = (Class<Object>) Class.forName("org.bouncycastle.util.encoders.Base64Encoder");
+            bEncoder = clazz.newInstance();
+            // Looking for encode( byte[] input, int offset, int length, OutputStream output)
+            bEncodeMethod = clazz.getMethod("encode", byte[].class, Integer.TYPE, Integer.TYPE, OutputStream.class);
+            logger.info(clazz.getName() + " is available.");
+            // Looking for decode( byte[] input, int offset, int length, OutputStream output)
+            bDecodeMethod = clazz.getMethod("decode", byte[].class, Integer.TYPE, Integer.TYPE, OutputStream.class);
+
+        } catch (ClassNotFoundException x) {
+        } // Ignore
+        catch (Exception x) {
+            logger.error("Failed to initialize use of org.bouncycastle.util.encoders.Base64Encoder", x);
+        }
+
+        if (aEncodeMethod == null && bEncodeMethod == null)
+            throw new IllegalStateException("No base64 encoder implementation is available.");
+    }
+
+
+    public static String encode(byte[] data) {
+        try {
+            if (aEncodeMethod != null) {
+                // Invoking a static method call, using null for the instance value
+                byte[] encodedBytes = (byte[]) aEncodeMethod.invoke(null, data, 2);
+                return new String(encodedBytes);
+            } else if (bEncodeMethod != null) {
+                ByteArrayOutputStream baos = new ByteArrayOutputStream();
+                bEncodeMethod.invoke(bEncoder, data, 0, data.length, baos);
+                return new String(baos.toByteArray());
+            }
+        } catch (Exception x) {
+            throw new IllegalStateException(x.getClass().getName() + ": " + x.getMessage());
+        }
+
+
+        throw new IllegalStateException("No base64 encoder implementation is available.");
+    }
+
+    public static byte[] decode(byte[] data) {
+        try {
+            if (aDecodeMethod != null) {
+                // Invoking a static method call, using null for the instance value
+                byte[] decodedBytes = (byte[]) aDecodeMethod.invoke(null, data, 2);
+                return decodedBytes;
+            } else if (bDecodeMethod != null) {
+                ByteArrayOutputStream baos = new ByteArrayOutputStream();
+                bDecodeMethod.invoke(bEncoder, data, 0, data.length, baos);
+                return baos.toByteArray();
+            }
+        } catch (Exception x) {
+            throw new IllegalStateException(x.getClass().getName() + ": " + x.getMessage());
+        }
+
+
+        throw new IllegalStateException("No base64 encoder implementation is available.");
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/DefaultResourceAdapter.java

@@ -0,0 +1,36 @@
+
+package kellinwood.security.zipsigner;
+
+import java.util.Locale;
+
+/**
+ * Default resource adapter.
+ */
+public class DefaultResourceAdapter implements ResourceAdapter {
+
+    @Override
+    public String getString(Item item, Object... args) {
+
+        switch (item) {
+            case INPUT_SAME_AS_OUTPUT_ERROR:
+                return "Input and output files are the same.  Specify a different name for the output.";
+            case AUTO_KEY_SELECTION_ERROR:
+                return "Unable to auto-select key for signing " + args[0];
+            case LOADING_CERTIFICATE_AND_KEY:
+                return "Loading certificate and private key";
+            case PARSING_CENTRAL_DIRECTORY:
+                return "Parsing the input's central directory";
+            case GENERATING_MANIFEST:
+                return "Generating manifest";
+            case GENERATING_SIGNATURE_FILE:
+                return "Generating signature file";
+            case GENERATING_SIGNATURE_BLOCK:
+                return "Generating signature block file";
+            case COPYING_ZIP_ENTRY:
+                return String.format(Locale.ENGLISH, "Copying zip entry %d of %d", args[0], args[1]);
+            default:
+                throw new IllegalArgumentException("Unknown item " + item);
+        }
+
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/HexDumpEncoder.java

@@ -0,0 +1,73 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+
+
+package kellinwood.security.zipsigner;
+
+import java.io.ByteArrayOutputStream;
+import java.io.IOException;
+
+/**
+ * Produces the classic hex dump with an address column, hex data
+ * section (16 bytes per row) and right-column printable character dislpay.
+ */
+public class HexDumpEncoder {
+
+    static HexEncoder encoder = new HexEncoder();
+
+    public static String encode(byte[] data) {
+
+        try {
+            ByteArrayOutputStream baos = new ByteArrayOutputStream();
+            encoder.encode(data, 0, data.length, baos);
+            byte[] hex = baos.toByteArray();
+
+            StringBuilder hexDumpOut = new StringBuilder();
+            for (int i = 0; i < hex.length; i += 32) {
+
+                int max = Math.min(i + 32, hex.length);
+
+                StringBuilder hexOut = new StringBuilder();
+                StringBuilder chrOut = new StringBuilder();
+
+                hexOut.append(String.format("%08x: ", (i / 2)));
+
+                for (int j = i; j < max; j += 2) {
+                    hexOut.append(Character.valueOf((char) hex[j]));
+                    hexOut.append(Character.valueOf((char) hex[j + 1]));
+                    if ((j + 2) % 4 == 0) hexOut.append(' ');
+
+                    int dataChar = data[j / 2];
+                    if (dataChar >= 32 && dataChar < 127) chrOut.append(Character.valueOf((char) dataChar));
+                    else chrOut.append('.');
+
+                }
+
+                hexDumpOut.append(hexOut.toString());
+                for (int k = hexOut.length(); k < 50; k++) hexDumpOut.append(' ');
+                hexDumpOut.append("  ");
+                hexDumpOut.append(chrOut);
+                hexDumpOut.append("\n");
+            }
+
+            return hexDumpOut.toString();
+        } catch (IOException x) {
+            throw new IllegalStateException(x.getClass().getName() + ": " + x.getMessage());
+        }
+    }
+
+}

app/src/full/java/kellinwood/security/zipsigner/HexEncoder.java

@@ -0,0 +1,182 @@
+
+package kellinwood.security.zipsigner;
+
+/*
+This file is a copy of org.bouncycastle.util.encoders.HexEncoder.
+  
+Please note: our license is an adaptation of the MIT X11 License and should be read as such.
+License
+
+Copyright (c) 2000 - 2011 The Legion Of The Bouncy Castle (http://www.bouncycastle.org)
+
+Permission is hereby granted, free of charge, to any person obtaining
+a copy of this software and associated documentation files (the
+"Software"), to deal in the Software without restriction, including
+without limitation the rights to use, copy, modify, merge, publish,
+distribute, sublicense, and/or sell copies of the Software, and to
+permit persons to whom the Software is furnished to do so, subject to
+the following conditions:
+
+The above copyright notice and this permission notice shall be
+included in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
+LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
+OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
+WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+*/
+
+import java.io.IOException;
+import java.io.OutputStream;
+
+public class HexEncoder {
+    protected final byte[] encodingTable =
+            {
+                    (byte) '0', (byte) '1', (byte) '2', (byte) '3', (byte) '4', (byte) '5', (byte) '6', (byte) '7',
+                    (byte) '8', (byte) '9', (byte) 'a', (byte) 'b', (byte) 'c', (byte) 'd', (byte) 'e', (byte) 'f'
+            };
+
+    /*
+     * set up the decoding table.
+     */
+    protected final byte[] decodingTable = new byte[128];
+
+    protected void initialiseDecodingTable() {
+        for (int i = 0; i < encodingTable.length; i++) {
+            decodingTable[encodingTable[i]] = (byte) i;
+        }
+
+        decodingTable['A'] = decodingTable['a'];
+        decodingTable['B'] = decodingTable['b'];
+        decodingTable['C'] = decodingTable['c'];
+        decodingTable['D'] = decodingTable['d'];
+        decodingTable['E'] = decodingTable['e'];
+        decodingTable['F'] = decodingTable['f'];
+    }
+
+    public HexEncoder() {
+        initialiseDecodingTable();
+    }
+
+    /**
+     * encode the input data producing a Hex output stream.
+     *
+     * @return the number of bytes produced.
+     */
+    public int encode(
+            byte[] data,
+            int off,
+            int length,
+            OutputStream out)
+            throws IOException {
+        for (int i = off; i < (off + length); i++) {
+            int v = data[i] & 0xff;
+
+            out.write(encodingTable[(v >>> 4)]);
+            out.write(encodingTable[v & 0xf]);
+        }
+
+        return length * 2;
+    }
+
+    private boolean ignore(
+            char c) {
+        return (c == '\n' || c == '\r' || c == '\t' || c == ' ');
+    }
+
+    /**
+     * decode the Hex encoded byte data writing it to the given output stream,
+     * whitespace characters will be ignored.
+     *
+     * @return the number of bytes produced.
+     */
+    public int decode(
+            byte[] data,
+            int off,
+            int length,
+            OutputStream out)
+            throws IOException {
+        byte b1, b2;
+        int outLen = 0;
+
+        int end = off + length;
+
+        while (end > off) {
+            if (!ignore((char) data[end - 1])) {
+                break;
+            }
+
+            end--;
+        }
+
+        int i = off;
+        while (i < end) {
+            while (i < end && ignore((char) data[i])) {
+                i++;
+            }
+
+            b1 = decodingTable[data[i++]];
+
+            while (i < end && ignore((char) data[i])) {
+                i++;
+            }
+
+            b2 = decodingTable[data[i++]];
+
+            out.write((b1 << 4) | b2);
+
+            outLen++;
+        }
+
+        return outLen;
+    }
+
+    /**
+     * decode the Hex encoded String data writing it to the given output stream,
+     * whitespace characters will be ignored.
+     *
+     * @return the number of bytes produced.
+     */
+    public int decode(
+            String data,
+            OutputStream out)
+            throws IOException {
+        byte b1, b2;
+        int length = 0;
+
+        int end = data.length();
+
+        while (end > 0) {
+            if (!ignore(data.charAt(end - 1))) {
+                break;
+            }
+
+            end--;
+        }
+
+        int i = 0;
+        while (i < end) {
+            while (i < end && ignore(data.charAt(i))) {
+                i++;
+            }
+
+            b1 = decodingTable[data.charAt(i++)];
+
+            while (i < end && ignore(data.charAt(i))) {
+                i++;
+            }
+
+            b2 = decodingTable[data.charAt(i++)];
+
+            out.write((b1 << 4) | b2);
+
+            length++;
+        }
+
+        return length;
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/KeySet.java

@@ -0,0 +1,95 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.security.zipsigner;
+
+import java.security.PrivateKey;
+import java.security.cert.X509Certificate;
+
+public class KeySet {
+
+    String name;
+
+    // certificate
+    X509Certificate publicKey = null;
+
+    // private key
+    PrivateKey privateKey = null;
+
+    // signature block template
+    byte[] sigBlockTemplate = null;
+
+    String signatureAlgorithm = "SHA1withRSA";
+
+    public KeySet() {
+    }
+
+    public KeySet(String name, X509Certificate publicKey, PrivateKey privateKey, byte[] sigBlockTemplate) {
+        this.name = name;
+        this.publicKey = publicKey;
+        this.privateKey = privateKey;
+        this.sigBlockTemplate = sigBlockTemplate;
+    }
+
+    public KeySet(String name, X509Certificate publicKey, PrivateKey privateKey, String signatureAlgorithm, byte[] sigBlockTemplate) {
+        this.name = name;
+        this.publicKey = publicKey;
+        this.privateKey = privateKey;
+        if (signatureAlgorithm != null) this.signatureAlgorithm = signatureAlgorithm;
+        this.sigBlockTemplate = sigBlockTemplate;
+    }
+
+    public String getName() {
+        return name;
+    }
+
+    public void setName(String name) {
+        this.name = name;
+    }
+
+    public X509Certificate getPublicKey() {
+        return publicKey;
+    }
+
+    public void setPublicKey(X509Certificate publicKey) {
+        this.publicKey = publicKey;
+    }
+
+    public PrivateKey getPrivateKey() {
+        return privateKey;
+    }
+
+    public void setPrivateKey(PrivateKey privateKey) {
+        this.privateKey = privateKey;
+    }
+
+    public byte[] getSigBlockTemplate() {
+        return sigBlockTemplate;
+    }
+
+    public void setSigBlockTemplate(byte[] sigBlockTemplate) {
+        this.sigBlockTemplate = sigBlockTemplate;
+    }
+
+    public String getSignatureAlgorithm() {
+        return signatureAlgorithm;
+    }
+
+    public void setSignatureAlgorithm(String signatureAlgorithm) {
+        if (signatureAlgorithm == null) signatureAlgorithm = "SHA1withRSA";
+        else this.signatureAlgorithm = signatureAlgorithm;
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/ProgressEvent.java

@@ -0,0 +1,52 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.security.zipsigner;
+
+public class ProgressEvent {
+
+    public static final int PRORITY_NORMAL = 0;
+    public static final int PRORITY_IMPORTANT = 1;
+
+    private String message;
+    private int percentDone;
+    private int priority;
+
+    public String getMessage() {
+        return message;
+    }
+
+    public void setMessage(String message) {
+        this.message = message;
+    }
+
+    public int getPercentDone() {
+        return percentDone;
+    }
+
+    public void setPercentDone(int percentDone) {
+        this.percentDone = percentDone;
+    }
+
+    public int getPriority() {
+        return priority;
+    }
+
+    public void setPriority(int priority) {
+        this.priority = priority;
+    }
+
+}

app/src/full/java/kellinwood/security/zipsigner/ProgressHelper.java

@@ -0,0 +1,80 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.security.zipsigner;
+
+import java.util.ArrayList;
+
+public class ProgressHelper {
+
+    private int progressTotalItems = 0;
+    private int progressCurrentItem = 0;
+    private ProgressEvent progressEvent = new ProgressEvent();
+
+    public void initProgress() {
+        progressTotalItems = 10000;
+        progressCurrentItem = 0;
+    }
+
+    public int getProgressTotalItems() {
+        return progressTotalItems;
+    }
+
+    public void setProgressTotalItems(int progressTotalItems) {
+        this.progressTotalItems = progressTotalItems;
+    }
+
+    public int getProgressCurrentItem() {
+        return progressCurrentItem;
+    }
+
+    public void setProgressCurrentItem(int progressCurrentItem) {
+        this.progressCurrentItem = progressCurrentItem;
+    }
+
+    public void progress(int priority, String message) {
+
+        progressCurrentItem += 1;
+
+        int percentDone;
+        if (progressTotalItems == 0) percentDone = 0;
+        else percentDone = (100 * progressCurrentItem) / progressTotalItems;
+
+        // Notify listeners here
+        for (ProgressListener listener : listeners) {
+            progressEvent.setMessage(message);
+            progressEvent.setPercentDone(percentDone);
+            progressEvent.setPriority(priority);
+            listener.onProgress(progressEvent);
+        }
+    }
+
+    private ArrayList<ProgressListener> listeners = new ArrayList<ProgressListener>();
+
+    @SuppressWarnings("unchecked")
+    public synchronized void addProgressListener(ProgressListener l) {
+        ArrayList<ProgressListener> list = (ArrayList<ProgressListener>) listeners.clone();
+        list.add(l);
+        listeners = list;
+    }
+
+    @SuppressWarnings("unchecked")
+    public synchronized void removeProgressListener(ProgressListener l) {
+        ArrayList<ProgressListener> list = (ArrayList<ProgressListener>) listeners.clone();
+        list.remove(l);
+        listeners = list;
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/ProgressListener.java

@@ -0,0 +1,26 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.security.zipsigner;
+
+public interface ProgressListener {
+
+    /**
+     * Called to notify the listener that progress has been made during
+     * the zip signing operation.
+     */
+    public void onProgress(ProgressEvent event);
+}

app/src/full/java/kellinwood/security/zipsigner/ResourceAdapter.java

@@ -0,0 +1,23 @@
+
+package kellinwood.security.zipsigner;
+
+/**
+ * Interface to obtain internationalized strings for the progress events.
+ */
+public interface ResourceAdapter {
+
+    public enum Item {
+        INPUT_SAME_AS_OUTPUT_ERROR,
+        AUTO_KEY_SELECTION_ERROR,
+        LOADING_CERTIFICATE_AND_KEY,
+        PARSING_CENTRAL_DIRECTORY,
+        GENERATING_MANIFEST,
+        GENERATING_SIGNATURE_FILE,
+        GENERATING_SIGNATURE_BLOCK,
+        COPYING_ZIP_ENTRY
+    }
+
+    ;
+
+    public String getString(Item item, Object... args);
+}

app/src/full/java/kellinwood/security/zipsigner/ZipSignature.java

@@ -0,0 +1,68 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.security.zipsigner;
+
+import javax.crypto.BadPaddingException;
+import javax.crypto.Cipher;
+import javax.crypto.IllegalBlockSizeException;
+import java.io.IOException;
+import java.security.GeneralSecurityException;
+import java.security.InvalidKeyException;
+import java.security.MessageDigest;
+import java.security.PrivateKey;
+
+@SuppressWarnings("restriction")
+public class ZipSignature {
+
+    byte[] beforeAlgorithmIdBytes = {0x30, 0x21};
+
+    //      byte[] algorithmIdBytes;    
+    //		algorithmIdBytes =  sun.security.x509.AlgorithmId.get("SHA1").encode();    
+    byte[] algorithmIdBytes = {0x30, 0x09, 0x06, 0x05, 0x2B, 0x0E, 0x03, 0x02, 0x1A, 0x05, 0x00};
+
+    byte[] afterAlgorithmIdBytes = {0x04, 0x14};
+
+    Cipher cipher;
+
+    MessageDigest md;
+
+
+    public ZipSignature() throws IOException, GeneralSecurityException {
+        md = MessageDigest.getInstance("SHA1");
+        cipher = Cipher.getInstance("RSA/ECB/PKCS1Padding");
+    }
+
+    public void initSign(PrivateKey privateKey) throws InvalidKeyException {
+        cipher.init(Cipher.ENCRYPT_MODE, privateKey);
+    }
+
+    public void update(byte[] data) {
+        md.update(data);
+    }
+
+    public void update(byte[] data, int offset, int count) {
+        md.update(data, offset, count);
+    }
+
+    public byte[] sign() throws BadPaddingException, IllegalBlockSizeException {
+        cipher.update(beforeAlgorithmIdBytes);
+        cipher.update(algorithmIdBytes);
+        cipher.update(afterAlgorithmIdBytes);
+        cipher.update(md.digest());
+        return cipher.doFinal();
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/ZipSigner.java

@@ -0,0 +1,796 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood
+ * Copyright (C) 2008 The Android Open Source Project
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+/* This file is a heavily modified version of com.android.signapk.SignApk.java.
+ * The changes include:
+ *   - addition of the signZip() convenience methods
+ *   - addition of a progress listener interface
+ *   - removal of main()
+ *   - switch to a signature generation method that verifies
+ *     in Android recovery
+ *   - eliminated dependency on sun.security and sun.misc APIs by 
+ *     using signature block template files.
+ */
+
+
+package kellinwood.security.zipsigner;
+
+import kellinwood.logging.LoggerInterface;
+import kellinwood.logging.LoggerManager;
+import kellinwood.zipio.ZioEntry;
+import kellinwood.zipio.ZipInput;
+import kellinwood.zipio.ZipOutput;
+
+import javax.crypto.Cipher;
+import javax.crypto.EncryptedPrivateKeyInfo;
+import javax.crypto.SecretKeyFactory;
+import javax.crypto.spec.PBEKeySpec;
+import java.io.ByteArrayOutputStream;
+import java.io.DataInputStream;
+import java.io.File;
+import java.io.FileOutputStream;
+import java.io.IOException;
+import java.io.InputStream;
+import java.io.OutputStream;
+import java.io.PrintStream;
+import java.lang.reflect.Method;
+import java.net.URL;
+import java.security.DigestOutputStream;
+import java.security.GeneralSecurityException;
+import java.security.Key;
+import java.security.KeyFactory;
+import java.security.KeyStore;
+import java.security.MessageDigest;
+import java.security.NoSuchAlgorithmException;
+import java.security.PrivateKey;
+import java.security.Provider;
+import java.security.Security;
+import java.security.cert.Certificate;
+import java.security.cert.CertificateFactory;
+import java.security.cert.X509Certificate;
+import java.security.spec.InvalidKeySpecException;
+import java.security.spec.KeySpec;
+import java.security.spec.PKCS8EncodedKeySpec;
+import java.util.ArrayList;
+import java.util.Collections;
+import java.util.HashMap;
+import java.util.List;
+import java.util.Map;
+import java.util.Observable;
+import java.util.Observer;
+import java.util.TreeMap;
+import java.util.jar.Attributes;
+import java.util.jar.JarFile;
+import java.util.jar.Manifest;
+import java.util.regex.Pattern;
+
+/**
+ * This is a modified copy of com.android.signapk.SignApk.java.  It provides an
+ * API to sign JAR files (including APKs and Zip/OTA updates) in
+ * a way compatible with the mincrypt verifier, using SHA1 and RSA keys.
+ * <p>
+ * Please see the README.txt file in the root of this project for usage instructions.
+ */
+public class ZipSigner {
+
+    private boolean canceled = false;
+
+    private ProgressHelper progressHelper = new ProgressHelper();
+    private ResourceAdapter resourceAdapter = new DefaultResourceAdapter();
+
+    static LoggerInterface log = null;
+
+    private static final String CERT_SF_NAME = "META-INF/CERT.SF";
+    private static final String CERT_RSA_NAME = "META-INF/CERT.RSA";
+
+    // Files matching this pattern are not copied to the output.
+    private static Pattern stripPattern =
+            Pattern.compile("^META-INF/(.*)[.](SF|RSA|DSA)$");
+
+    Map<String, KeySet> loadedKeys = new HashMap<String, KeySet>();
+    KeySet keySet = null;
+
+    public static LoggerInterface getLogger() {
+        if (log == null) log = LoggerManager.getLogger(ZipSigner.class.getName());
+        return log;
+    }
+
+    public static final String MODE_AUTO_TESTKEY = "auto-testkey";
+    public static final String MODE_AUTO_NONE = "auto-none";
+    public static final String MODE_AUTO = "auto";
+    public static final String KEY_NONE = "none";
+    public static final String KEY_TESTKEY = "testkey";
+
+    // Allowable key modes.
+    public static final String[] SUPPORTED_KEY_MODES =
+            new String[]{MODE_AUTO_TESTKEY, MODE_AUTO, MODE_AUTO_NONE, "media", "platform", "shared", KEY_TESTKEY, KEY_NONE};
+
+    String keymode = KEY_TESTKEY; // backwards compatible with versions that only signed with this key
+
+    Map<String, String> autoKeyDetect = new HashMap<String, String>();
+
+    AutoKeyObservable autoKeyObservable = new AutoKeyObservable();
+
+    public ZipSigner() throws ClassNotFoundException, IllegalAccessException, InstantiationException {
+        // MD5 of the first 1458 bytes of the signature block generated by the key, mapped to the key name
+        autoKeyDetect.put("aa9852bc5a53272ac8031d49b65e4b0e", "media");
+        autoKeyDetect.put("e60418c4b638f20d0721e115674ca11f", "platform");
+        autoKeyDetect.put("3e24e49741b60c215c010dc6048fca7d", "shared");
+        autoKeyDetect.put("dab2cead827ef5313f28e22b6fa8479f", "testkey");
+
+    }
+
+    public ResourceAdapter getResourceAdapter() {
+        return resourceAdapter;
+    }
+
+    public void setResourceAdapter(ResourceAdapter resourceAdapter) {
+        this.resourceAdapter = resourceAdapter;
+    }
+
+    // when the key mode is automatic, the observers are called when the key is determined
+    public void addAutoKeyObserver(Observer o) {
+        autoKeyObservable.addObserver(o);
+    }
+
+    public String getKeymode() {
+        return keymode;
+    }
+
+    public void setKeymode(String km) throws IOException, GeneralSecurityException {
+        if (getLogger().isDebugEnabled()) getLogger().debug("setKeymode: " + km);
+        keymode = km;
+        if (keymode.startsWith(MODE_AUTO)) {
+            keySet = null;
+        } else {
+            progressHelper.initProgress();
+            loadKeys(keymode);
+        }
+    }
+
+    public static String[] getSupportedKeyModes() {
+        return SUPPORTED_KEY_MODES;
+    }
+
+
+    protected String autoDetectKey(String mode, Map<String, ZioEntry> zioEntries)
+            throws NoSuchAlgorithmException, IOException {
+        boolean debug = getLogger().isDebugEnabled();
+
+        if (!mode.startsWith(MODE_AUTO)) return mode;
+
+
+        // Auto-determine which keys to use
+        String keyName = null;
+        // Start by finding the signature block file in the input.
+        for (Map.Entry<String, ZioEntry> entry : zioEntries.entrySet()) {
+            String entryName = entry.getKey();
+            if (entryName.startsWith("META-INF/") && entryName.endsWith(".RSA")) {
+
+                // Compute MD5 of the first 1458 bytes, which is the size of our signature block templates -- 
+                // e.g., the portion of the sig block file that is the same for a given certificate.                    
+                MessageDigest md5 = MessageDigest.getInstance("MD5");
+                byte[] entryData = entry.getValue().getData();
+                if (entryData.length < 1458) break; // sig block too short to be a supported key 
+                md5.update(entryData, 0, 1458);
+                byte[] rawDigest = md5.digest();
+
+                // Create the hex representation of the digest value
+                StringBuilder builder = new StringBuilder();
+                for (byte b : rawDigest) {
+                    builder.append(String.format("%02x", b));
+                }
+
+                String md5String = builder.toString();
+                // Lookup the key name
+                keyName = autoKeyDetect.get(md5String);
+
+
+                if (debug) {
+                    if (keyName != null) {
+                        getLogger().debug(String.format("Auto-determined key=%s using md5=%s", keyName, md5String));
+                    } else {
+                        getLogger().debug(String.format("Auto key determination failed for md5=%s", md5String));
+                    }
+                }
+                if (keyName != null) return keyName;
+            }
+        }
+
+        if (mode.equals(MODE_AUTO_TESTKEY)) {
+            // in auto-testkey mode, fallback to the testkey if it couldn't be determined
+            if (debug) getLogger().debug("Falling back to key=" + keyName);
+            return KEY_TESTKEY;
+
+        } else if (mode.equals(MODE_AUTO_NONE)) {
+            // in auto-node mode, simply copy the input to the output when the key can't be determined.
+            if (debug) getLogger().debug("Unable to determine key, returning: " + KEY_NONE);
+            return KEY_NONE;
+        }
+
+        return null;
+    }
+
+    public void issueLoadingCertAndKeysProgressEvent() {
+        progressHelper.progress(ProgressEvent.PRORITY_IMPORTANT, resourceAdapter.getString(ResourceAdapter.Item.LOADING_CERTIFICATE_AND_KEY));
+    }
+
+    // Loads one of the built-in keys (media, platform, shared, testkey)
+    public void loadKeys(String name)
+            throws IOException, GeneralSecurityException {
+
+        keySet = loadedKeys.get(name);
+        if (keySet != null) return;
+
+        keySet = new KeySet();
+        keySet.setName(name);
+        loadedKeys.put(name, keySet);
+
+        if (KEY_NONE.equals(name)) return;
+
+        issueLoadingCertAndKeysProgressEvent();
+
+        // load the private key
+        URL privateKeyUrl = getClass().getResource("/keys/" + name + ".pk8");
+        keySet.setPrivateKey(readPrivateKey(privateKeyUrl, null));
+
+        // load the certificate
+        URL publicKeyUrl = getClass().getResource("/keys/" + name + ".x509.pem");
+        keySet.setPublicKey(readPublicKey(publicKeyUrl));
+
+        // load the signature block template
+        URL sigBlockTemplateUrl = getClass().getResource("/keys/" + name + ".sbt");
+        if (sigBlockTemplateUrl != null) {
+            keySet.setSigBlockTemplate(readContentAsBytes(sigBlockTemplateUrl));
+        }
+    }
+
+    public void setKeys(String name, X509Certificate publicKey, PrivateKey privateKey, byte[] signatureBlockTemplate) {
+        keySet = new KeySet(name, publicKey, privateKey, signatureBlockTemplate);
+    }
+
+    public void setKeys(String name, X509Certificate publicKey, PrivateKey privateKey, String signatureAlgorithm, byte[] signatureBlockTemplate) {
+        keySet = new KeySet(name, publicKey, privateKey, signatureAlgorithm, signatureBlockTemplate);
+    }
+
+    public KeySet getKeySet() {
+        return keySet;
+    }
+
+    // Allow the operation to be canceled.
+    public void cancel() {
+        canceled = true;
+    }
+
+    // Allow the instance to sign again if previously canceled.
+    public void resetCanceled() {
+        canceled = false;
+    }
+
+    public boolean isCanceled() {
+        return canceled;
+    }
+
+    @SuppressWarnings("unchecked")
+    public void loadProvider(String providerClassName)
+            throws ClassNotFoundException, IllegalAccessException, InstantiationException {
+        Class providerClass = Class.forName(providerClassName);
+        Provider provider = (Provider) providerClass.newInstance();
+        Security.insertProviderAt(provider, 1);
+    }
+
+
+    public X509Certificate readPublicKey(URL publicKeyUrl)
+            throws IOException, GeneralSecurityException {
+        InputStream input = publicKeyUrl.openStream();
+        try {
+            CertificateFactory cf = CertificateFactory.getInstance("X.509");
+            return (X509Certificate) cf.generateCertificate(input);
+        } finally {
+            input.close();
+        }
+    }
+
+    /**
+     * Decrypt an encrypted PKCS 8 format private key.
+     * <p>
+     * Based on ghstark's post on Aug 6, 2006 at
+     * http://forums.sun.com/thread.jspa?threadID=758133&messageID=4330949
+     *
+     * @param encryptedPrivateKey The raw data of the private key
+     * @param keyPassword         the key password
+     */
+    private KeySpec decryptPrivateKey(byte[] encryptedPrivateKey, String keyPassword)
+            throws GeneralSecurityException {
+        EncryptedPrivateKeyInfo epkInfo;
+        try {
+            epkInfo = new EncryptedPrivateKeyInfo(encryptedPrivateKey);
+        } catch (IOException ex) {
+            // Probably not an encrypted key.
+            return null;
+        }
+
+        char[] keyPasswd = keyPassword.toCharArray();
+
+        SecretKeyFactory skFactory = SecretKeyFactory.getInstance(epkInfo.getAlgName());
+        Key key = skFactory.generateSecret(new PBEKeySpec(keyPasswd));
+
+        Cipher cipher = Cipher.getInstance(epkInfo.getAlgName());
+        cipher.init(Cipher.DECRYPT_MODE, key, epkInfo.getAlgParameters());
+
+        try {
+            return epkInfo.getKeySpec(cipher);
+        } catch (InvalidKeySpecException ex) {
+            getLogger().error("signapk: Password for private key may be bad.");
+            throw ex;
+        }
+    }
+
+    /**
+     * Fetch the content at the specified URL and return it as a byte array.
+     */
+    public byte[] readContentAsBytes(URL contentUrl) throws IOException {
+        return readContentAsBytes(contentUrl.openStream());
+    }
+
+    /**
+     * Fetch the content from the given stream and return it as a byte array.
+     */
+    public byte[] readContentAsBytes(InputStream input) throws IOException {
+        ByteArrayOutputStream baos = new ByteArrayOutputStream();
+
+        byte[] buffer = new byte[2048];
+
+        int numRead = input.read(buffer);
+        while (numRead != -1) {
+            baos.write(buffer, 0, numRead);
+            numRead = input.read(buffer);
+        }
+
+        byte[] bytes = baos.toByteArray();
+        return bytes;
+    }
+
+    /**
+     * Read a PKCS 8 format private key.
+     */
+    public PrivateKey readPrivateKey(URL privateKeyUrl, String keyPassword)
+            throws IOException, GeneralSecurityException {
+        DataInputStream input = new DataInputStream(privateKeyUrl.openStream());
+        try {
+            byte[] bytes = readContentAsBytes(input);
+
+            KeySpec spec = decryptPrivateKey(bytes, keyPassword);
+            if (spec == null) {
+                spec = new PKCS8EncodedKeySpec(bytes);
+            }
+
+            try {
+                return KeyFactory.getInstance("RSA").generatePrivate(spec);
+            } catch (InvalidKeySpecException ex) {
+                return KeyFactory.getInstance("DSA").generatePrivate(spec);
+            }
+        } finally {
+            input.close();
+        }
+    }
+
+    /**
+     * Add the SHA1 of every file to the manifest, creating it if necessary.
+     */
+    private Manifest addDigestsToManifest(Map<String, ZioEntry> entries)
+            throws IOException, GeneralSecurityException {
+        Manifest input = null;
+        ZioEntry manifestEntry = entries.get(JarFile.MANIFEST_NAME);
+        if (manifestEntry != null) {
+            input = new Manifest();
+            input.read(manifestEntry.getInputStream());
+        }
+        Manifest output = new Manifest();
+        Attributes main = output.getMainAttributes();
+        if (input != null) {
+            main.putAll(input.getMainAttributes());
+        } else {
+            main.putValue("Manifest-Version", "1.0");
+            main.putValue("Created-By", "1.0 (Android SignApk)");
+        }
+
+        // BASE64Encoder base64 = new BASE64Encoder();
+        MessageDigest md = MessageDigest.getInstance("SHA1");
+        byte[] buffer = new byte[512];
+        int num;
+
+        // We sort the input entries by name, and add them to the
+        // output manifest in sorted order.  We expect that the output
+        // map will be deterministic.
+
+        TreeMap<String, ZioEntry> byName = new TreeMap<String, ZioEntry>();
+        byName.putAll(entries);
+
+        boolean debug = getLogger().isDebugEnabled();
+        if (debug) getLogger().debug("Manifest entries:");
+        for (ZioEntry entry : byName.values()) {
+            if (canceled) break;
+            String name = entry.getName();
+            if (debug) getLogger().debug(name);
+            if (!entry.isDirectory() && !name.equals(JarFile.MANIFEST_NAME) &&
+                    !name.equals(CERT_SF_NAME) && !name.equals(CERT_RSA_NAME) &&
+                    (stripPattern == null ||
+                            !stripPattern.matcher(name).matches())) {
+
+                progressHelper.progress(ProgressEvent.PRORITY_NORMAL, resourceAdapter.getString(ResourceAdapter.Item.GENERATING_MANIFEST));
+                InputStream data = entry.getInputStream();
+                while ((num = data.read(buffer)) > 0) {
+                    md.update(buffer, 0, num);
+                }
+
+                Attributes attr = null;
+                if (input != null) {
+                    java.util.jar.Attributes inAttr = input.getAttributes(name);
+                    if (inAttr != null) attr = new Attributes(inAttr);
+                }
+                if (attr == null) attr = new Attributes();
+                attr.putValue("SHA1-Digest", Base64.encode(md.digest()));
+                output.getEntries().put(name, attr);
+            }
+        }
+
+        return output;
+    }
+
+
+    /**
+     * Write the signature file to the given output stream.
+     */
+    private void generateSignatureFile(Manifest manifest, OutputStream out)
+            throws IOException, GeneralSecurityException {
+        out.write(("Signature-Version: 1.0\r\n").getBytes());
+        out.write(("Created-By: 1.0 (Android SignApk)\r\n").getBytes());
+
+
+        // BASE64Encoder base64 = new BASE64Encoder();
+        MessageDigest md = MessageDigest.getInstance("SHA1");
+        PrintStream print = new PrintStream(
+                new DigestOutputStream(new ByteArrayOutputStream(), md),
+                true, "UTF-8");
+
+        // Digest of the entire manifest
+        manifest.write(print);
+        print.flush();
+
+        out.write(("SHA1-Digest-Manifest: " + Base64.encode(md.digest()) + "\r\n\r\n").getBytes());
+
+        Map<String, Attributes> entries = manifest.getEntries();
+        for (Map.Entry<String, Attributes> entry : entries.entrySet()) {
+            if (canceled) break;
+            progressHelper.progress(ProgressEvent.PRORITY_NORMAL, resourceAdapter.getString(ResourceAdapter.Item.GENERATING_SIGNATURE_FILE));
+            // Digest of the manifest stanza for this entry.
+            String nameEntry = "Name: " + entry.getKey() + "\r\n";
+            print.print(nameEntry);
+            for (Map.Entry<Object, Object> att : entry.getValue().entrySet()) {
+                print.print(att.getKey() + ": " + att.getValue() + "\r\n");
+            }
+            print.print("\r\n");
+            print.flush();
+
+            out.write(nameEntry.getBytes());
+            out.write(("SHA1-Digest: " + Base64.encode(md.digest()) + "\r\n\r\n").getBytes());
+        }
+
+    }
+
+    /**
+     * Write a .RSA file with a digital signature.
+     */
+    @SuppressWarnings("unchecked")
+    private void writeSignatureBlock(KeySet keySet, byte[] signatureFileBytes, OutputStream out)
+            throws IOException, GeneralSecurityException {
+        if (keySet.getSigBlockTemplate() != null) {
+
+            // Can't use default Signature on Android.  Although it generates a signature that can be verified by jarsigner,
+            // the recovery program appears to require a specific algorithm/mode/padding.  So we use the custom ZipSignature instead.
+            // Signature signature = Signature.getInstance("SHA1withRSA");
+            ZipSignature signature = new ZipSignature();
+            signature.initSign(keySet.getPrivateKey());
+            signature.update(signatureFileBytes);
+            byte[] signatureBytes = signature.sign();
+
+            out.write(keySet.getSigBlockTemplate());
+            out.write(signatureBytes);
+
+            if (getLogger().isDebugEnabled()) {
+
+                MessageDigest md = MessageDigest.getInstance("SHA1");
+                md.update(signatureFileBytes);
+                byte[] sfDigest = md.digest();
+                getLogger().debug("Sig File SHA1: \n" + HexDumpEncoder.encode(sfDigest));
+
+                getLogger().debug("Signature: \n" + HexDumpEncoder.encode(signatureBytes));
+
+                Cipher cipher = Cipher.getInstance("RSA/ECB/PKCS1Padding");
+                cipher.init(Cipher.DECRYPT_MODE, keySet.getPublicKey());
+
+                byte[] tmpData = cipher.doFinal(signatureBytes);
+                getLogger().debug("Signature Decrypted: \n" + HexDumpEncoder.encode(tmpData));
+            }
+        } else {
+            try {
+                byte[] sigBlock = null;
+                // Use reflection to call the optional generator.
+                Class generatorClass = Class.forName("kellinwood.security.zipsigner.optional.SignatureBlockGenerator");
+                Method generatorMethod = generatorClass.getMethod("generate", KeySet.class, (new byte[1]).getClass());
+                sigBlock = (byte[]) generatorMethod.invoke(null, keySet, signatureFileBytes);
+                out.write(sigBlock);
+            } catch (Exception x) {
+                throw new RuntimeException(x.getMessage(), x);
+            }
+        }
+    }
+
+    /**
+     * Copy all the files in a manifest from input to output.  We set
+     * the modification times in the output to a fixed time, so as to
+     * reduce variation in the output file and make incremental OTAs
+     * more efficient.
+     */
+    private void copyFiles(Manifest manifest, Map<String, ZioEntry> input, ZipOutput output, long timestamp)
+            throws IOException {
+        Map<String, Attributes> entries = manifest.getEntries();
+        List<String> names = new ArrayList<String>(entries.keySet());
+        Collections.sort(names);
+        int i = 1;
+        for (String name : names) {
+            if (canceled) break;
+            progressHelper.progress(ProgressEvent.PRORITY_NORMAL, resourceAdapter.getString(ResourceAdapter.Item.COPYING_ZIP_ENTRY, i, names.size()));
+            i += 1;
+            ZioEntry inEntry = input.get(name);
+            inEntry.setTime(timestamp);
+            output.write(inEntry);
+
+        }
+    }
+
+    /**
+     * Copy all the files from input to output.
+     */
+    private void copyFiles(Map<String, ZioEntry> input, ZipOutput output)
+            throws IOException {
+        int i = 1;
+        for (ZioEntry inEntry : input.values()) {
+            if (canceled) break;
+            progressHelper.progress(ProgressEvent.PRORITY_NORMAL, resourceAdapter.getString(ResourceAdapter.Item.COPYING_ZIP_ENTRY, i, input.size()));
+            i += 1;
+            output.write(inEntry);
+        }
+    }
+
+    /**
+     * @deprecated - use the version that takes the passwords as char[]
+     */
+    public void signZip(URL keystoreURL,
+                        String keystoreType,
+                        String keystorePw,
+                        String certAlias,
+                        String certPw,
+                        String inputZipFilename,
+                        String outputZipFilename)
+            throws ClassNotFoundException, IllegalAccessException, InstantiationException,
+            IOException, GeneralSecurityException {
+        signZip(keystoreURL, keystoreType, keystorePw.toCharArray(), certAlias, certPw.toCharArray(), "SHA1withRSA", inputZipFilename, outputZipFilename);
+    }
+
+    public void signZip(URL keystoreURL,
+                        String keystoreType,
+                        char[] keystorePw,
+                        String certAlias,
+                        char[] certPw,
+                        String signatureAlgorithm,
+                        String inputZipFilename,
+                        String outputZipFilename)
+            throws ClassNotFoundException, IllegalAccessException, InstantiationException,
+            IOException, GeneralSecurityException {
+        InputStream keystoreStream = null;
+
+
+        try {
+            KeyStore keystore = null;
+            if (keystoreType == null) keystoreType = KeyStore.getDefaultType();
+            keystore = KeyStore.getInstance(keystoreType);
+
+            keystoreStream = keystoreURL.openStream();
+            keystore.load(keystoreStream, keystorePw);
+            Certificate cert = keystore.getCertificate(certAlias);
+            X509Certificate publicKey = (X509Certificate) cert;
+            Key key = keystore.getKey(certAlias, certPw);
+            PrivateKey privateKey = (PrivateKey) key;
+
+            setKeys("custom", publicKey, privateKey, signatureAlgorithm, null);
+
+            signZip(inputZipFilename, outputZipFilename);
+        } finally {
+            if (keystoreStream != null) keystoreStream.close();
+        }
+    }
+
+
+    /**
+     * Sign the input with the default test key and certificate.
+     * Save result to output file.
+     */
+    public void signZip(Map<String, ZioEntry> zioEntries, String outputZipFilename)
+            throws IOException, GeneralSecurityException {
+        progressHelper.initProgress();
+        signZip(zioEntries, new FileOutputStream(outputZipFilename), outputZipFilename);
+    }
+
+
+    /**
+     * Sign the file using the given public key cert, private key,
+     * and signature block template.  The signature block template
+     * parameter may be null, but if so
+     * android-sun-jarsign-support.jar must be in the classpath.
+     */
+    public void signZip(String inputZipFilename, String outputZipFilename)
+            throws IOException, GeneralSecurityException {
+        File inFile = new File(inputZipFilename).getCanonicalFile();
+        File outFile = new File(outputZipFilename).getCanonicalFile();
+
+        if (inFile.equals(outFile)) {
+            throw new IllegalArgumentException(resourceAdapter.getString(ResourceAdapter.Item.INPUT_SAME_AS_OUTPUT_ERROR));
+        }
+
+        progressHelper.initProgress();
+        progressHelper.progress(ProgressEvent.PRORITY_IMPORTANT, resourceAdapter.getString(ResourceAdapter.Item.PARSING_CENTRAL_DIRECTORY));
+
+        ZipInput input = null;
+        OutputStream outStream = null;
+        try {
+            input = ZipInput.read(inputZipFilename);
+            outStream = new FileOutputStream(outputZipFilename);
+            signZip(input.getEntries(), outStream, outputZipFilename);
+        } finally {
+            if (input != null) input.close();
+            if (outStream != null) outStream.close();
+        }
+    }
+
+    /**
+     * Sign the
+     * and signature block template.  The signature block template
+     * parameter may be null, but if so
+     * android-sun-jarsign-support.jar must be in the classpath.
+     */
+    public void signZip(Map<String, ZioEntry> zioEntries, OutputStream outputStream, String outputZipFilename)
+            throws IOException, GeneralSecurityException {
+        boolean debug = getLogger().isDebugEnabled();
+
+        progressHelper.initProgress();
+        if (keySet == null) {
+            if (!keymode.startsWith(MODE_AUTO))
+                throw new IllegalStateException("No keys configured for signing the file!");
+
+            // Auto-determine which keys to use
+            String keyName = this.autoDetectKey(keymode, zioEntries);
+            if (keyName == null)
+                throw new AutoKeyException(resourceAdapter.getString(ResourceAdapter.Item.AUTO_KEY_SELECTION_ERROR, new File(outputZipFilename).getName()));
+
+            autoKeyObservable.notifyObservers(keyName);
+
+            loadKeys(keyName);
+
+        }
+
+
+        ZipOutput zipOutput = null;
+
+        try {
+
+
+            zipOutput = new ZipOutput(outputStream);
+
+            if (KEY_NONE.equals(keySet.getName())) {
+                progressHelper.setProgressTotalItems(zioEntries.size());
+                progressHelper.setProgressCurrentItem(0);
+                copyFiles(zioEntries, zipOutput);
+                return;
+            }
+
+            // Calculate total steps to complete for accurate progress percentages.
+            int progressTotalItems = 0;
+            for (ZioEntry entry : zioEntries.values()) {
+                String name = entry.getName();
+                if (!entry.isDirectory() && !name.equals(JarFile.MANIFEST_NAME) &&
+                        !name.equals(CERT_SF_NAME) && !name.equals(CERT_RSA_NAME) &&
+                        (stripPattern == null ||
+                                !stripPattern.matcher(name).matches())) {
+                    progressTotalItems += 3;  // digest for manifest, digest in sig file, copy data
+                }
+            }
+            progressTotalItems += 1; // CERT.RSA generation
+            progressHelper.setProgressTotalItems(progressTotalItems);
+            progressHelper.setProgressCurrentItem(0);
+
+            // Assume the certificate is valid for at least an hour.
+            long timestamp = keySet.getPublicKey().getNotBefore().getTime() + 3600L * 1000;
+
+            // MANIFEST.MF
+            // progress(ProgressEvent.PRORITY_NORMAL, JarFile.MANIFEST_NAME);
+            Manifest manifest = addDigestsToManifest(zioEntries);
+            if (canceled) return;
+            ZioEntry ze = new ZioEntry(JarFile.MANIFEST_NAME);
+            ze.setTime(timestamp);
+            manifest.write(ze.getOutputStream());
+            zipOutput.write(ze);
+
+
+            // CERT.SF
+            ze = new ZioEntry(CERT_SF_NAME);
+            ze.setTime(timestamp);
+
+            ByteArrayOutputStream out = new ByteArrayOutputStream();
+            generateSignatureFile(manifest, out);
+            if (canceled) return;
+            byte[] sfBytes = out.toByteArray();
+            if (debug) {
+                getLogger().debug("Signature File: \n" + new String(sfBytes) + "\n" +
+                        HexDumpEncoder.encode(sfBytes));
+            }
+            ze.getOutputStream().write(sfBytes);
+            zipOutput.write(ze);
+
+            // CERT.RSA
+            progressHelper.progress(ProgressEvent.PRORITY_NORMAL, resourceAdapter.getString(ResourceAdapter.Item.GENERATING_SIGNATURE_BLOCK));
+            ze = new ZioEntry(CERT_RSA_NAME);
+            ze.setTime(timestamp);
+            writeSignatureBlock(keySet, sfBytes, ze.getOutputStream());
+            zipOutput.write(ze);
+            if (canceled) return;
+
+            // Everything else
+            copyFiles(manifest, zioEntries, zipOutput, timestamp);
+            if (canceled) return;
+
+        } finally {
+            if (zipOutput != null) zipOutput.close();
+            if (canceled) {
+                try {
+                    if (outputZipFilename != null) new File(outputZipFilename).delete();
+                } catch (Throwable t) {
+                    getLogger().warning(t.getClass().getName() + ":" + t.getMessage());
+                }
+            }
+        }
+    }
+
+    public void addProgressListener(ProgressListener l) {
+        progressHelper.addProgressListener(l);
+    }
+
+    public synchronized void removeProgressListener(ProgressListener l) {
+        progressHelper.removeProgressListener(l);
+    }
+
+
+    public static class AutoKeyObservable extends Observable {
+        @Override
+        public void notifyObservers(Object arg) {
+            super.setChanged();
+            super.notifyObservers(arg);
+        }
+
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/optional/CertCreator.java

@@ -0,0 +1,135 @@
+
+package kellinwood.security.zipsigner.optional;
+
+import kellinwood.security.zipsigner.KeySet;
+import org.bouncycastle.jce.X509Principal;
+import org.bouncycastle.x509.X509V3CertificateGenerator;
+
+import java.io.File;
+import java.io.IOException;
+import java.math.BigInteger;
+import java.security.KeyPair;
+import java.security.KeyPairGenerator;
+import java.security.KeyStore;
+import java.security.SecureRandom;
+import java.security.cert.X509Certificate;
+import java.util.Date;
+
+
+/**
+ * All methods create self-signed certificates.
+ */
+public class CertCreator {
+
+    /**
+     * Creates a new keystore and self-signed key.  The key will have the same password as the key, and will be
+     * RSA 2048, with the cert signed using SHA1withRSA.  The certificate will have a validity of
+     * 30 years).
+     *
+     * @param storePath               - pathname of the new keystore file
+     * @param password                - keystore and key password
+     * @param keyName                 - the new key will have this as its alias within the keystore
+     * @param distinguishedNameValues - contains Country, State, Locality,...,Common Name, etc.
+     */
+    public static void createKeystoreAndKey(String storePath, char[] password,
+                                            String keyName, DistinguishedNameValues distinguishedNameValues) {
+        createKeystoreAndKey(storePath, password, "RSA", 2048, keyName, password, "SHA1withRSA", 30,
+                distinguishedNameValues);
+    }
+
+
+    public static KeySet createKeystoreAndKey(String storePath, char[] storePass,
+                                              String keyAlgorithm, int keySize, String keyName, char[] keyPass,
+                                              String certSignatureAlgorithm, int certValidityYears, DistinguishedNameValues distinguishedNameValues) {
+        try {
+
+            KeySet keySet = createKey(keyAlgorithm, keySize, keyName, certSignatureAlgorithm, certValidityYears,
+                    distinguishedNameValues);
+
+
+            KeyStore privateKS = KeyStoreFileManager.createKeyStore(storePath, storePass);
+
+            privateKS.setKeyEntry(keyName, keySet.getPrivateKey(),
+                    keyPass,
+                    new java.security.cert.Certificate[]{keySet.getPublicKey()});
+
+            File sfile = new File(storePath);
+            if (sfile.exists()) {
+                throw new IOException("File already exists: " + storePath);
+            }
+            KeyStoreFileManager.writeKeyStore(privateKS, storePath, storePass);
+
+            return keySet;
+        } catch (RuntimeException x) {
+            throw x;
+        } catch (Exception x) {
+            throw new RuntimeException(x.getMessage(), x);
+        }
+    }
+
+    /**
+     * Create a new key and store it in an existing keystore.
+     */
+    public static KeySet createKey(String storePath, char[] storePass,
+                                   String keyAlgorithm, int keySize, String keyName, char[] keyPass,
+                                   String certSignatureAlgorithm, int certValidityYears,
+                                   DistinguishedNameValues distinguishedNameValues) {
+        try {
+
+            KeySet keySet = createKey(keyAlgorithm, keySize, keyName, certSignatureAlgorithm, certValidityYears,
+                    distinguishedNameValues);
+
+            KeyStore privateKS = KeyStoreFileManager.loadKeyStore(storePath, storePass);
+
+            privateKS.setKeyEntry(keyName, keySet.getPrivateKey(),
+                    keyPass,
+                    new java.security.cert.Certificate[]{keySet.getPublicKey()});
+
+            KeyStoreFileManager.writeKeyStore(privateKS, storePath, storePass);
+
+            return keySet;
+
+        } catch (RuntimeException x) {
+            throw x;
+        } catch (Exception x) {
+            throw new RuntimeException(x.getMessage(), x);
+        }
+    }
+
+    public static KeySet createKey(String keyAlgorithm, int keySize, String keyName,
+                                   String certSignatureAlgorithm, int certValidityYears, DistinguishedNameValues distinguishedNameValues) {
+        try {
+            KeyPairGenerator keyPairGenerator = KeyPairGenerator.getInstance(keyAlgorithm);
+            keyPairGenerator.initialize(keySize);
+            KeyPair KPair = keyPairGenerator.generateKeyPair();
+
+            X509V3CertificateGenerator v3CertGen = new X509V3CertificateGenerator();
+
+            X509Principal principal = distinguishedNameValues.getPrincipal();
+
+            // generate a postitive serial number
+            BigInteger serialNumber = BigInteger.valueOf(new SecureRandom().nextInt());
+            while (serialNumber.compareTo(BigInteger.ZERO) < 0) {
+                serialNumber = BigInteger.valueOf(new SecureRandom().nextInt());
+            }
+            v3CertGen.setSerialNumber(serialNumber);
+            v3CertGen.setIssuerDN(principal);
+            v3CertGen.setNotBefore(new Date(System.currentTimeMillis() - 1000L * 60L * 60L * 24L * 30L));
+            v3CertGen.setNotAfter(new Date(System.currentTimeMillis() + (1000L * 60L * 60L * 24L * 366L * (long) certValidityYears)));
+            v3CertGen.setSubjectDN(principal);
+
+            v3CertGen.setPublicKey(KPair.getPublic());
+            v3CertGen.setSignatureAlgorithm(certSignatureAlgorithm);
+
+            X509Certificate PKCertificate = v3CertGen.generate(KPair.getPrivate(), "BC");
+
+            KeySet keySet = new KeySet();
+            keySet.setName(keyName);
+            keySet.setPrivateKey(KPair.getPrivate());
+            keySet.setPublicKey(PKCertificate);
+            return keySet;
+        } catch (Exception x) {
+            throw new RuntimeException(x.getMessage(), x);
+        }
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/optional/CustomKeySigner.java

@@ -0,0 +1,39 @@
+
+package kellinwood.security.zipsigner.optional;
+
+import kellinwood.security.zipsigner.ZipSigner;
+
+import java.security.Key;
+import java.security.KeyStore;
+import java.security.PrivateKey;
+import java.security.cert.Certificate;
+import java.security.cert.X509Certificate;
+
+/**
+ */
+public class CustomKeySigner {
+
+    /**
+     * KeyStore-type agnostic.  This method will sign the zip file, automatically handling JKS or BKS keystores.
+     */
+    public static void signZip(ZipSigner zipSigner,
+                               String keystorePath,
+                               char[] keystorePw,
+                               String certAlias,
+                               char[] certPw,
+                               String signatureAlgorithm,
+                               String inputZipFilename,
+                               String outputZipFilename)
+            throws Exception {
+        zipSigner.issueLoadingCertAndKeysProgressEvent();
+        KeyStore keystore = KeyStoreFileManager.loadKeyStore(keystorePath, keystorePw);
+        Certificate cert = keystore.getCertificate(certAlias);
+        X509Certificate publicKey = (X509Certificate) cert;
+        Key key = keystore.getKey(certAlias, certPw);
+        PrivateKey privateKey = (PrivateKey) key;
+
+        zipSigner.setKeys("custom", publicKey, privateKey, signatureAlgorithm, null);
+        zipSigner.signZip(inputZipFilename, outputZipFilename);
+    }
+
+}

app/src/full/java/kellinwood/security/zipsigner/optional/DistinguishedNameValues.java

@@ -0,0 +1,89 @@
+
+package kellinwood.security.zipsigner.optional;
+
+import org.bouncycastle.asn1.ASN1ObjectIdentifier;
+import org.bouncycastle.asn1.x500.style.BCStyle;
+import org.bouncycastle.jce.X509Principal;
+
+import java.util.LinkedHashMap;
+import java.util.Map;
+import java.util.Vector;
+
+
+/**
+ * Helper class for dealing with the distinguished name RDNs.
+ */
+public class DistinguishedNameValues extends LinkedHashMap<ASN1ObjectIdentifier, String> {
+
+    public DistinguishedNameValues() {
+        put(BCStyle.C, null);
+        put(BCStyle.ST, null);
+        put(BCStyle.L, null);
+        put(BCStyle.STREET, null);
+        put(BCStyle.O, null);
+        put(BCStyle.OU, null);
+        put(BCStyle.CN, null);
+    }
+
+    public String put(ASN1ObjectIdentifier oid, String value) {
+        if (value != null && value.equals("")) value = null;
+        if (containsKey(oid)) super.put(oid, value); // preserve original ordering
+        else {
+            super.put(oid, value);
+//            String cn = remove(BCStyle.CN); // CN will always be last.
+//            put(BCStyle.CN,cn);
+        }
+        return value;
+    }
+
+    public void setCountry(String country) {
+        put(BCStyle.C, country);
+    }
+
+    public void setState(String state) {
+        put(BCStyle.ST, state);
+    }
+
+    public void setLocality(String locality) {
+        put(BCStyle.L, locality);
+    }
+
+    public void setStreet(String street) {
+        put(BCStyle.STREET, street);
+    }
+
+    public void setOrganization(String organization) {
+        put(BCStyle.O, organization);
+    }
+
+    public void setOrganizationalUnit(String organizationalUnit) {
+        put(BCStyle.OU, organizationalUnit);
+    }
+
+    public void setCommonName(String commonName) {
+        put(BCStyle.CN, commonName);
+    }
+
+    @Override
+    public int size() {
+        int result = 0;
+        for (String value : values()) {
+            if (value != null) result += 1;
+        }
+        return result;
+    }
+
+    public X509Principal getPrincipal() {
+        Vector<ASN1ObjectIdentifier> oids = new Vector<ASN1ObjectIdentifier>();
+        Vector<String> values = new Vector<String>();
+
+        for (Map.Entry<ASN1ObjectIdentifier, String> entry : entrySet()) {
+            if (entry.getValue() != null && !entry.getValue().equals("")) {
+                oids.add(entry.getKey());
+                values.add(entry.getValue());
+            }
+        }
+
+        return new X509Principal(oids, values);
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/optional/Fingerprint.java

@@ -0,0 +1,71 @@
+
+package kellinwood.security.zipsigner.optional;
+
+import kellinwood.logging.LoggerInterface;
+import kellinwood.logging.LoggerManager;
+import kellinwood.security.zipsigner.Base64;
+import org.bouncycastle.util.encoders.HexTranslator;
+
+import java.security.MessageDigest;
+import java.util.Locale;
+
+/**
+ * User: ken
+ * Date: 1/17/13
+ */
+public class Fingerprint {
+
+    static LoggerInterface logger = LoggerManager.getLogger(Fingerprint.class.getName());
+
+    static byte[] calcDigest(String algorithm, byte[] encodedCert) {
+        byte[] result = null;
+        try {
+            MessageDigest messageDigest = MessageDigest.getInstance(algorithm);
+            messageDigest.update(encodedCert);
+            result = messageDigest.digest();
+        } catch (Exception x) {
+            logger.error(x.getMessage(), x);
+        }
+        return result;
+    }
+
+    public static String hexFingerprint(String algorithm, byte[] encodedCert) {
+        try {
+            byte[] digest = calcDigest(algorithm, encodedCert);
+            if (digest == null) return null;
+            HexTranslator hexTranslator = new HexTranslator();
+            byte[] hex = new byte[digest.length * 2];
+            hexTranslator.encode(digest, 0, digest.length, hex, 0);
+            StringBuilder builder = new StringBuilder();
+            for (int i = 0; i < hex.length; i += 2) {
+                builder.append((char) hex[i]);
+                builder.append((char) hex[i + 1]);
+                if (i != (hex.length - 2)) builder.append(':');
+            }
+            return builder.toString().toUpperCase(Locale.ENGLISH);
+        } catch (Exception x) {
+            logger.error(x.getMessage(), x);
+        }
+        return null;
+    }
+
+//    public static void main(String[] args) {
+//        byte[] data = "The Silence of the Lambs is a really good movie.".getBytes();
+//        System.out.println(hexFingerprint("MD5", data));
+//        System.out.println(hexFingerprint("SHA1", data));
+//        System.out.println(base64Fingerprint("SHA1", data));
+//
+//    }
+
+    public static String base64Fingerprint(String algorithm, byte[] encodedCert) {
+        String result = null;
+        try {
+            byte[] digest = calcDigest(algorithm, encodedCert);
+            if (digest == null) return result;
+            return Base64.encode(digest);
+        } catch (Exception x) {
+            logger.error(x.getMessage(), x);
+        }
+        return result;
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/optional/JKS.java

@@ -0,0 +1,500 @@
+/* JKS.java -- implementation of the "JKS" key store.
+   Copyright (C) 2003  Casey Marshall <rsdio@metastatic.org>
+
+Permission to use, copy, modify, distribute, and sell this software and
+its documentation for any purpose is hereby granted without fee,
+provided that the above copyright notice appear in all copies and that
+both that copyright notice and this permission notice appear in
+supporting documentation.  No representations are made about the
+suitability of this software for any purpose.  It is provided "as is"
+without express or implied warranty.
+
+This program was derived by reverse-engineering Sun's own
+implementation, using only the public API that is available in the 1.4.1
+JDK.  Hence nothing in this program is, or is derived from, anything
+copyrighted by Sun Microsystems.  While the "Binary Evaluation License
+Agreement" that the JDK is licensed under contains blanket statements
+that forbid reverse-engineering (among other things), it is my position
+that US copyright law does not and cannot forbid reverse-engineering of
+software to produce a compatible implementation.  There are, in fact,
+numerous clauses in copyright law that specifically allow
+reverse-engineering, and therefore I believe it is outside of Sun's
+power to enforce restrictions on reverse-engineering of their software,
+and it is irresponsible for them to claim they can.  */
+
+
+package kellinwood.security.zipsigner.optional;
+
+import javax.crypto.EncryptedPrivateKeyInfo;
+import javax.crypto.spec.SecretKeySpec;
+import java.io.ByteArrayInputStream;
+import java.io.DataInputStream;
+import java.io.DataOutputStream;
+import java.io.IOException;
+import java.io.InputStream;
+import java.io.OutputStream;
+import java.security.DigestInputStream;
+import java.security.DigestOutputStream;
+import java.security.Key;
+import java.security.KeyFactory;
+import java.security.KeyStoreException;
+import java.security.KeyStoreSpi;
+import java.security.MessageDigest;
+import java.security.NoSuchAlgorithmException;
+import java.security.SecureRandom;
+import java.security.UnrecoverableKeyException;
+import java.security.cert.Certificate;
+import java.security.cert.CertificateException;
+import java.security.cert.CertificateFactory;
+import java.security.spec.InvalidKeySpecException;
+import java.security.spec.PKCS8EncodedKeySpec;
+import java.util.Date;
+import java.util.Enumeration;
+import java.util.HashMap;
+import java.util.Iterator;
+import java.util.Locale;
+import java.util.Vector;
+
+/**
+ * This is an implementation of Sun's proprietary key store
+ * algorithm, called "JKS" for "Java Key Store". This implementation was
+ * created entirely through reverse-engineering.
+ * <p>
+ * <p>The format of JKS files is, from the start of the file:
+ * <p>
+ * <ol>
+ * <li>Magic bytes. This is a four-byte integer, in big-endian byte
+ * order, equal to <code>0xFEEDFEED</code>.</li>
+ * <li>The version number (probably), as a four-byte integer (all
+ * multibyte integral types are in big-endian byte order). The current
+ * version number (in modern distributions of the JDK) is 2.</li>
+ * <li>The number of entrires in this keystore, as a four-byte
+ * integer. Call this value <i>n</i></li>
+ * <li>Then, <i>n</i> times:
+ * <ol>
+ * <li>The entry type, a four-byte int. The value 1 denotes a private
+ * key entry, and 2 denotes a trusted certificate.</li>
+ * <li>The entry's alias, formatted as strings such as those written
+ * by <a
+ * href="http://java.sun.com/j2se/1.4.1/docs/api/java/io/DataOutput.html#writeUTF(java.lang.String)">DataOutput.writeUTF(String)</a>.</li>
+ * <li>An eight-byte integer, representing the entry's creation date,
+ * in milliseconds since the epoch.
+ * <p>
+ * <p>Then, if the entry is a private key entry:
+ * <ol>
+ * <li>The size of the encoded key as a four-byte int, then that
+ * number of bytes. The encoded key is the DER encoded bytes of the
+ * <a
+ * href="http://java.sun.com/j2se/1.4.1/docs/api/javax/crypto/EncryptedPrivateKeyInfo.html">EncryptedPrivateKeyInfo</a> structure (the
+ * encryption algorithm is discussed later).</li>
+ * <li>A four-byte integer, followed by that many encoded
+ * certificates, encoded as described in the trusted certificates
+ * section.</li>
+ * </ol>
+ * <p>
+ * <p>Otherwise, the entry is a trusted certificate, which is encoded
+ * as the name of the encoding algorithm (e.g. X.509), encoded the same
+ * way as alias names. Then, a four-byte integer representing the size
+ * of the encoded certificate, then that many bytes representing the
+ * encoded certificate (e.g. the DER bytes in the case of X.509).
+ * </li>
+ * </ol>
+ * </li>
+ * <li>Then, the signature.</li>
+ * </ol>
+ * </ol>
+ * </li>
+ * </ol>
+ * <p>
+ * <p>(See <a href="genkey.java">this file</a> for some idea of how I
+ * was able to figure out these algorithms)</p>
+ * <p>
+ * <p>Decrypting the key works as follows:
+ * <p>
+ * <ol>
+ * <li>The key length is the length of the ciphertext minus 40. The
+ * encrypted key, <code>ekey</code>, is the middle bytes of the
+ * ciphertext.</li>
+ * <li>Take the first 20 bytes of the encrypted key as a seed value,
+ * <code>K[0]</code>.</li>
+ * <li>Compute <code>K[1] ... K[n]</code>, where
+ * <code>|K[i]| = 20</code>, <code>n = ceil(|ekey| / 20)</code>, and
+ * <code>K[i] = SHA-1(UTF-16BE(password) + K[i-1])</code>.</li>
+ * <li><code>key = ekey ^ (K[1] + ... + K[n])</code>.</li>
+ * <li>The last 20 bytes are the checksum, computed as <code>H =
+ * SHA-1(UTF-16BE(password) + key)</code>. If this value does not match
+ * the last 20 bytes of the ciphertext, output <code>FAIL</code>. Otherwise,
+ * output <code>key</code>.</li>
+ * </ol>
+ * <p>
+ * <p>The signature is defined as <code>SHA-1(UTF-16BE(password) +
+ * US_ASCII("Mighty Aphrodite") + encoded_keystore)</code> (yup, Sun
+ * engineers are just that clever).
+ * <p>
+ * <p>(Above, SHA-1 denotes the secure hash algorithm, UTF-16BE the
+ * big-endian byte representation of a UTF-16 string, and US_ASCII the
+ * ASCII byte representation of the string.)
+ * <p>
+ * <p>The source code of this class should be available in the file <a
+ * href="http://metastatic.org/source/JKS.java">JKS.java</a>.
+ *
+ * @author Casey Marshall (rsdio@metastatic.org)
+ *         <p>
+ *         Changes by Ken Ellinwood:
+ *         ** Fixed a NullPointerException in engineLoad(). This method must return gracefully if the keystore input stream is null.
+ *         ** engineGetCertificateEntry() was updated to return the first cert in the chain for private key entries.
+ *         ** Lowercase the alias names, otherwise keytool chokes on the file created by this code.
+ *         ** Fixed the integrity check in engineLoad(), previously the exception was never thrown regardless of password value.
+ */
+public class JKS extends KeyStoreSpi {
+
+    // Constants and fields.
+    // ------------------------------------------------------------------------
+
+    /**
+     * Ah, Sun. So goddamned clever with those magic bytes.
+     */
+    private static final int MAGIC = 0xFEEDFEED;
+
+    private static final int PRIVATE_KEY = 1;
+    private static final int TRUSTED_CERT = 2;
+
+    private final Vector aliases;
+    private final HashMap trustedCerts;
+    private final HashMap privateKeys;
+    private final HashMap certChains;
+    private final HashMap dates;
+
+    // Constructor.
+    // ------------------------------------------------------------------------
+
+    public JKS() {
+        super();
+        aliases = new Vector();
+        trustedCerts = new HashMap();
+        privateKeys = new HashMap();
+        certChains = new HashMap();
+        dates = new HashMap();
+
+    }
+
+    // Instance methods.
+    // ------------------------------------------------------------------------
+
+    public Key engineGetKey(String alias, char[] password)
+            throws NoSuchAlgorithmException, UnrecoverableKeyException {
+        alias = alias.toLowerCase(Locale.ENGLISH);
+
+        if (!privateKeys.containsKey(alias))
+            return null;
+        byte[] key = decryptKey((byte[]) privateKeys.get(alias),
+                charsToBytes(password));
+        Certificate[] chain = engineGetCertificateChain(alias);
+        if (chain.length > 0) {
+            try {
+                // Private and public keys MUST have the same algorithm.
+                KeyFactory fact = KeyFactory.getInstance(
+                        chain[0].getPublicKey().getAlgorithm());
+                return fact.generatePrivate(new PKCS8EncodedKeySpec(key));
+            } catch (InvalidKeySpecException x) {
+                throw new UnrecoverableKeyException(x.getMessage());
+            }
+        } else
+            return new SecretKeySpec(key, alias);
+    }
+
+    public Certificate[] engineGetCertificateChain(String alias) {
+        alias = alias.toLowerCase(Locale.ENGLISH);
+        return (Certificate[]) certChains.get(alias);
+    }
+
+    public Certificate engineGetCertificate(String alias) {
+        alias = alias.toLowerCase(Locale.ENGLISH);
+        if (engineIsKeyEntry(alias)) {
+            Certificate[] certChain = (Certificate[]) certChains.get(alias);
+            if (certChain != null && certChain.length > 0) return certChain[0];
+        }
+        return (Certificate) trustedCerts.get(alias);
+    }
+
+    public Date engineGetCreationDate(String alias) {
+        alias = alias.toLowerCase(Locale.ENGLISH);
+        return (Date) dates.get(alias);
+    }
+
+    // XXX implement writing methods.
+
+    public void engineSetKeyEntry(String alias, Key key, char[] passwd, Certificate[] certChain)
+            throws KeyStoreException {
+        alias = alias.toLowerCase(Locale.ENGLISH);
+        if (trustedCerts.containsKey(alias))
+            throw new KeyStoreException("\"" + alias + " is a trusted certificate entry");
+        privateKeys.put(alias, encryptKey(key, charsToBytes(passwd)));
+        if (certChain != null)
+            certChains.put(alias, certChain);
+        else
+            certChains.put(alias, new Certificate[0]);
+        if (!aliases.contains(alias)) {
+            dates.put(alias, new Date());
+            aliases.add(alias);
+        }
+    }
+
+    public void engineSetKeyEntry(String alias, byte[] encodedKey, Certificate[] certChain)
+            throws KeyStoreException {
+        alias = alias.toLowerCase(Locale.ENGLISH);
+        if (trustedCerts.containsKey(alias))
+            throw new KeyStoreException("\"" + alias + "\" is a trusted certificate entry");
+        try {
+            new EncryptedPrivateKeyInfo(encodedKey);
+        } catch (IOException ioe) {
+            throw new KeyStoreException("encoded key is not an EncryptedPrivateKeyInfo");
+        }
+        privateKeys.put(alias, encodedKey);
+        if (certChain != null)
+            certChains.put(alias, certChain);
+        else
+            certChains.put(alias, new Certificate[0]);
+        if (!aliases.contains(alias)) {
+            dates.put(alias, new Date());
+            aliases.add(alias);
+        }
+    }
+
+    public void engineSetCertificateEntry(String alias, Certificate cert)
+            throws KeyStoreException {
+        alias = alias.toLowerCase(Locale.ENGLISH);
+        if (privateKeys.containsKey(alias))
+            throw new KeyStoreException("\"" + alias + "\" is a private key entry");
+        if (cert == null)
+            throw new NullPointerException();
+        trustedCerts.put(alias, cert);
+        if (!aliases.contains(alias)) {
+            dates.put(alias, new Date());
+            aliases.add(alias);
+        }
+    }
+
+    public void engineDeleteEntry(String alias) throws KeyStoreException {
+        alias = alias.toLowerCase(Locale.ENGLISH);
+        aliases.remove(alias);
+    }
+
+    public Enumeration engineAliases() {
+        return aliases.elements();
+    }
+
+    public boolean engineContainsAlias(String alias) {
+        alias = alias.toLowerCase(Locale.ENGLISH);
+        return aliases.contains(alias);
+    }
+
+    public int engineSize() {
+        return aliases.size();
+    }
+
+    public boolean engineIsKeyEntry(String alias) {
+        alias = alias.toLowerCase(Locale.ENGLISH);
+        return privateKeys.containsKey(alias);
+    }
+
+    public boolean engineIsCertificateEntry(String alias) {
+        alias = alias.toLowerCase(Locale.ENGLISH);
+        return trustedCerts.containsKey(alias);
+    }
+
+    public String engineGetCertificateAlias(Certificate cert) {
+        for (Iterator keys = trustedCerts.keySet().iterator(); keys.hasNext(); ) {
+            String alias = (String) keys.next();
+            if (cert.equals(trustedCerts.get(alias)))
+                return alias;
+        }
+        return null;
+    }
+
+    public void engineStore(OutputStream out, char[] passwd)
+            throws IOException, NoSuchAlgorithmException, CertificateException {
+        MessageDigest md = MessageDigest.getInstance("SHA1");
+        md.update(charsToBytes(passwd));
+        md.update("Mighty Aphrodite".getBytes("UTF-8"));
+        DataOutputStream dout = new DataOutputStream(new DigestOutputStream(out, md));
+        dout.writeInt(MAGIC);
+        dout.writeInt(2);
+        dout.writeInt(aliases.size());
+        for (Enumeration e = aliases.elements(); e.hasMoreElements(); ) {
+            String alias = (String) e.nextElement();
+            if (trustedCerts.containsKey(alias)) {
+                dout.writeInt(TRUSTED_CERT);
+                dout.writeUTF(alias);
+                dout.writeLong(((Date) dates.get(alias)).getTime());
+                writeCert(dout, (Certificate) trustedCerts.get(alias));
+            } else {
+                dout.writeInt(PRIVATE_KEY);
+                dout.writeUTF(alias);
+                dout.writeLong(((Date) dates.get(alias)).getTime());
+                byte[] key = (byte[]) privateKeys.get(alias);
+                dout.writeInt(key.length);
+                dout.write(key);
+                Certificate[] chain = (Certificate[]) certChains.get(alias);
+                dout.writeInt(chain.length);
+                for (int i = 0; i < chain.length; i++)
+                    writeCert(dout, chain[i]);
+            }
+        }
+        byte[] digest = md.digest();
+        dout.write(digest);
+    }
+
+    public void engineLoad(InputStream in, char[] passwd)
+            throws IOException, NoSuchAlgorithmException, CertificateException {
+        MessageDigest md = MessageDigest.getInstance("SHA");
+        if (passwd != null) md.update(charsToBytes(passwd));
+        md.update("Mighty Aphrodite".getBytes("UTF-8")); // HAR HAR
+        aliases.clear();
+        trustedCerts.clear();
+        privateKeys.clear();
+        certChains.clear();
+        dates.clear();
+        if (in == null) return;
+        DataInputStream din = new DataInputStream(new DigestInputStream(in, md));
+        if (din.readInt() != MAGIC)
+            throw new IOException("not a JavaKeyStore");
+        din.readInt();  // version no.
+        final int n = din.readInt();
+        aliases.ensureCapacity(n);
+        if (n < 0)
+            throw new LoadKeystoreException("Malformed key store");
+        for (int i = 0; i < n; i++) {
+            int type = din.readInt();
+            String alias = din.readUTF();
+            aliases.add(alias);
+            dates.put(alias, new Date(din.readLong()));
+            switch (type) {
+                case PRIVATE_KEY:
+                    int len = din.readInt();
+                    byte[] encoded = new byte[len];
+                    din.read(encoded);
+                    privateKeys.put(alias, encoded);
+                    int count = din.readInt();
+                    Certificate[] chain = new Certificate[count];
+                    for (int j = 0; j < count; j++)
+                        chain[j] = readCert(din);
+                    certChains.put(alias, chain);
+                    break;
+
+                case TRUSTED_CERT:
+                    trustedCerts.put(alias, readCert(din));
+                    break;
+
+                default:
+                    throw new LoadKeystoreException("Malformed key store");
+            }
+        }
+
+        if (passwd != null) {
+            byte[] computedHash = md.digest();
+            byte[] storedHash = new byte[20];
+            din.read(storedHash);
+            if (!MessageDigest.isEqual(storedHash, computedHash)) {
+                throw new LoadKeystoreException("Incorrect password, or integrity check failed.");
+            }
+        }
+    }
+
+    // Own methods.
+    // ------------------------------------------------------------------------
+
+    private static Certificate readCert(DataInputStream in)
+            throws IOException, CertificateException, NoSuchAlgorithmException {
+        String type = in.readUTF();
+        int len = in.readInt();
+        byte[] encoded = new byte[len];
+        in.read(encoded);
+        CertificateFactory factory = CertificateFactory.getInstance(type);
+        return factory.generateCertificate(new ByteArrayInputStream(encoded));
+    }
+
+    private static void writeCert(DataOutputStream dout, Certificate cert)
+            throws IOException, CertificateException {
+        dout.writeUTF(cert.getType());
+        byte[] b = cert.getEncoded();
+        dout.writeInt(b.length);
+        dout.write(b);
+    }
+
+    private static byte[] decryptKey(byte[] encryptedPKI, byte[] passwd)
+            throws UnrecoverableKeyException {
+        try {
+            EncryptedPrivateKeyInfo epki =
+                    new EncryptedPrivateKeyInfo(encryptedPKI);
+            byte[] encr = epki.getEncryptedData();
+            byte[] keystream = new byte[20];
+            System.arraycopy(encr, 0, keystream, 0, 20);
+            byte[] check = new byte[20];
+            System.arraycopy(encr, encr.length - 20, check, 0, 20);
+            byte[] key = new byte[encr.length - 40];
+            MessageDigest sha = MessageDigest.getInstance("SHA1");
+            int count = 0;
+            while (count < key.length) {
+                sha.reset();
+                sha.update(passwd);
+                sha.update(keystream);
+                sha.digest(keystream, 0, keystream.length);
+                for (int i = 0; i < keystream.length && count < key.length; i++) {
+                    key[count] = (byte) (keystream[i] ^ encr[count + 20]);
+                    count++;
+                }
+            }
+            sha.reset();
+            sha.update(passwd);
+            sha.update(key);
+            if (!MessageDigest.isEqual(check, sha.digest()))
+                throw new UnrecoverableKeyException("checksum mismatch");
+            return key;
+        } catch (Exception x) {
+            throw new UnrecoverableKeyException(x.getMessage());
+        }
+    }
+
+    private static byte[] encryptKey(Key key, byte[] passwd)
+            throws KeyStoreException {
+        try {
+            MessageDigest sha = MessageDigest.getInstance("SHA1");
+            SecureRandom rand = SecureRandom.getInstance("SHA1PRNG");
+            byte[] k = key.getEncoded();
+            byte[] encrypted = new byte[k.length + 40];
+            byte[] keystream = rand.getSeed(20);
+            System.arraycopy(keystream, 0, encrypted, 0, 20);
+            int count = 0;
+            while (count < k.length) {
+                sha.reset();
+                sha.update(passwd);
+                sha.update(keystream);
+                sha.digest(keystream, 0, keystream.length);
+                for (int i = 0; i < keystream.length && count < k.length; i++) {
+                    encrypted[count + 20] = (byte) (keystream[i] ^ k[count]);
+                    count++;
+                }
+            }
+            sha.reset();
+            sha.update(passwd);
+            sha.update(k);
+            sha.digest(encrypted, encrypted.length - 20, 20);
+            // 1.3.6.1.4.1.42.2.17.1.1 is Sun's private OID for this
+            // encryption algorithm.
+            return new EncryptedPrivateKeyInfo("1.3.6.1.4.1.42.2.17.1.1",
+                    encrypted).getEncoded();
+        } catch (Exception x) {
+            throw new KeyStoreException(x.getMessage());
+        }
+    }
+
+    private static byte[] charsToBytes(char[] passwd) {
+        byte[] buf = new byte[passwd.length * 2];
+        for (int i = 0, j = 0; i < passwd.length; i++) {
+            buf[j++] = (byte) (passwd[i] >>> 8);
+            buf[j++] = (byte) passwd[i];
+        }
+        return buf;
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/optional/JksKeyStore.java

@@ -0,0 +1,13 @@
+
+package kellinwood.security.zipsigner.optional;
+
+
+import java.security.KeyStore;
+
+public class JksKeyStore extends KeyStore {
+
+    public JksKeyStore() {
+        super(new JKS(), KeyStoreFileManager.getProvider(), "jks");
+    }
+
+}

app/src/full/java/kellinwood/security/zipsigner/optional/KeyNameConflictException.java

@@ -0,0 +1,5 @@
+
+package kellinwood.security.zipsigner.optional;
+
+public class KeyNameConflictException extends Exception {
+}

app/src/full/java/kellinwood/security/zipsigner/optional/KeyStoreFileManager.java

@@ -0,0 +1,285 @@
+
+package kellinwood.security.zipsigner.optional;
+
+
+import kellinwood.logging.LoggerInterface;
+import kellinwood.logging.LoggerManager;
+import org.bouncycastle.jce.provider.BouncyCastleProvider;
+
+import java.io.File;
+import java.io.FileInputStream;
+import java.io.FileOutputStream;
+import java.io.FileWriter;
+import java.io.IOException;
+import java.io.PrintWriter;
+import java.security.Key;
+import java.security.KeyStore;
+import java.security.Provider;
+import java.security.Security;
+import java.security.cert.Certificate;
+import java.util.Locale;
+
+
+/**
+ */
+public class KeyStoreFileManager {
+
+    static Provider provider = new BouncyCastleProvider();
+
+    public static Provider getProvider() {
+        return provider;
+    }
+
+    public static void setProvider(Provider provider) {
+        if (KeyStoreFileManager.provider != null) Security.removeProvider(KeyStoreFileManager.provider.getName());
+        KeyStoreFileManager.provider = provider;
+        Security.addProvider(provider);
+    }
+
+    static LoggerInterface logger = LoggerManager.getLogger(KeyStoreFileManager.class.getName());
+
+    static {
+        // Add the bouncycastle version of the BC provider so that the implementation classes returned
+        // from the keystore are all from the bouncycastle libs.
+        Security.addProvider(getProvider());
+    }
+
+
+    public static KeyStore loadKeyStore(String keystorePath, String encodedPassword)
+            throws Exception {
+        char password[] = null;
+        try {
+            if (encodedPassword != null) {
+                password = PasswordObfuscator.getInstance().decodeKeystorePassword(keystorePath, encodedPassword);
+            }
+            return loadKeyStore(keystorePath, password);
+        } finally {
+            if (password != null) PasswordObfuscator.flush(password);
+        }
+    }
+
+    public static KeyStore createKeyStore(String keystorePath, char[] password)
+            throws Exception {
+        KeyStore ks = null;
+        if (keystorePath.toLowerCase(Locale.ENGLISH).endsWith(".bks")) {
+            ks = KeyStore.getInstance("bks", new BouncyCastleProvider());
+        } else ks = new JksKeyStore();
+        ks.load(null, password);
+
+        return ks;
+    }
+
+    public static KeyStore loadKeyStore(String keystorePath, char[] password)
+            throws Exception {
+        KeyStore ks = null;
+        try {
+            ks = new JksKeyStore();
+            FileInputStream fis = new FileInputStream(keystorePath);
+            ks.load(fis, password);
+            fis.close();
+            return ks;
+        } catch (LoadKeystoreException x) {
+            // This type of exception is thrown when the keystore is a JKS keystore, but the file is malformed
+            // or the validity/password check failed.  In this case don't bother to attempt loading it as a BKS keystore.
+            throw x;
+        } catch (Exception x) {
+            // logger.warning( x.getMessage(), x);
+            try {
+                ks = KeyStore.getInstance("bks", getProvider());
+                FileInputStream fis = new FileInputStream(keystorePath);
+                ks.load(fis, password);
+                fis.close();
+                return ks;
+            } catch (Exception e) {
+                throw new RuntimeException("Failed to load keystore: " + e.getMessage(), e);
+            }
+        }
+    }
+
+    public static void writeKeyStore(KeyStore ks, String keystorePath, String encodedPassword)
+            throws Exception {
+        char password[] = null;
+        try {
+            password = PasswordObfuscator.getInstance().decodeKeystorePassword(keystorePath, encodedPassword);
+            writeKeyStore(ks, keystorePath, password);
+        } finally {
+            if (password != null) PasswordObfuscator.flush(password);
+        }
+    }
+
+    public static void writeKeyStore(KeyStore ks, String keystorePath, char[] password)
+            throws Exception {
+
+        File keystoreFile = new File(keystorePath);
+        try {
+            if (keystoreFile.exists()) {
+                // I've had some trouble saving new versions of the keystore file in which the file becomes empty/corrupt.
+                // Saving the new version to a new file and creating a backup of the old version.
+                File tmpFile = File.createTempFile(keystoreFile.getName(), null, keystoreFile.getParentFile());
+                FileOutputStream fos = new FileOutputStream(tmpFile);
+                ks.store(fos, password);
+                fos.flush();
+                fos.close();
+                /* create a backup of the previous version
+                int i = 1;
+                File backup = new File( keystorePath + "." + i + ".bak");
+                while (backup.exists()) {
+                    i += 1;
+                    backup = new File( keystorePath + "." + i + ".bak");
+                }
+                renameTo(keystoreFile, backup);
+                */
+                renameTo(tmpFile, keystoreFile);
+            } else {
+                FileOutputStream fos = new FileOutputStream(keystorePath);
+                ks.store(fos, password);
+                fos.close();
+            }
+        } catch (Exception x) {
+            try {
+                File logfile = File.createTempFile("zipsigner-error", ".log", keystoreFile.getParentFile());
+                PrintWriter pw = new PrintWriter(new FileWriter(logfile));
+                x.printStackTrace(pw);
+                pw.flush();
+                pw.close();
+            } catch (Exception y) {
+            }
+            throw x;
+        }
+    }
+
+
+    static void copyFile(File srcFile, File destFile, boolean preserveFileDate) throws IOException {
+        if (destFile.exists() && destFile.isDirectory()) {
+            throw new IOException("Destination '" + destFile + "' exists but is a directory");
+        }
+
+        FileInputStream input = new FileInputStream(srcFile);
+        try {
+            FileOutputStream output = new FileOutputStream(destFile);
+            try {
+                byte[] buffer = new byte[4096];
+                long count = 0;
+                int n = 0;
+                while (-1 != (n = input.read(buffer))) {
+                    output.write(buffer, 0, n);
+                    count += n;
+                }
+            } finally {
+                try {
+                    output.close();
+                } catch (IOException x) {
+                } // Ignore
+            }
+        } finally {
+            try {
+                input.close();
+            } catch (IOException x) {
+            }
+        }
+
+        if (srcFile.length() != destFile.length()) {
+            throw new IOException("Failed to copy full contents from '" +
+                    srcFile + "' to '" + destFile + "'");
+        }
+        if (preserveFileDate) {
+            destFile.setLastModified(srcFile.lastModified());
+        }
+    }
+
+
+    public static void renameTo(File fromFile, File toFile)
+            throws IOException {
+        copyFile(fromFile, toFile, true);
+        if (!fromFile.delete()) throw new IOException("Failed to delete " + fromFile);
+    }
+
+    public static void deleteKey(String storePath, String storePass, String keyName)
+            throws Exception {
+        KeyStore ks = loadKeyStore(storePath, storePass);
+        ks.deleteEntry(keyName);
+        writeKeyStore(ks, storePath, storePass);
+    }
+
+    public static String renameKey(String keystorePath, String storePass, String oldKeyName, String newKeyName, String keyPass)
+            throws Exception {
+        char[] keyPw = null;
+
+        try {
+            KeyStore ks = loadKeyStore(keystorePath, storePass);
+            if (ks instanceof JksKeyStore) newKeyName = newKeyName.toLowerCase(Locale.ENGLISH);
+
+            if (ks.containsAlias(newKeyName)) throw new KeyNameConflictException();
+
+            keyPw = PasswordObfuscator.getInstance().decodeAliasPassword(keystorePath, oldKeyName, keyPass);
+            Key key = ks.getKey(oldKeyName, keyPw);
+            Certificate cert = ks.getCertificate(oldKeyName);
+
+            ks.setKeyEntry(newKeyName, key, keyPw, new Certificate[]{cert});
+            ks.deleteEntry(oldKeyName);
+
+            writeKeyStore(ks, keystorePath, storePass);
+            return newKeyName;
+        } finally {
+            PasswordObfuscator.flush(keyPw);
+        }
+    }
+
+    public static KeyStore.Entry getKeyEntry(String keystorePath, String storePass, String keyName, String keyPass)
+            throws Exception {
+        char[] keyPw = null;
+        KeyStore.PasswordProtection passwordProtection = null;
+
+        try {
+            KeyStore ks = loadKeyStore(keystorePath, storePass);
+            keyPw = PasswordObfuscator.getInstance().decodeAliasPassword(keystorePath, keyName, keyPass);
+            passwordProtection = new KeyStore.PasswordProtection(keyPw);
+            return ks.getEntry(keyName, passwordProtection);
+        } finally {
+            if (keyPw != null) PasswordObfuscator.flush(keyPw);
+            if (passwordProtection != null) passwordProtection.destroy();
+        }
+    }
+
+    public static boolean containsKey(String keystorePath, String storePass, String keyName)
+            throws Exception {
+        KeyStore ks = loadKeyStore(keystorePath, storePass);
+        return ks.containsAlias(keyName);
+    }
+
+
+    /**
+     * @param keystorePath
+     * @param encodedPassword
+     * @throws Exception if the password is invalid
+     */
+    public static void validateKeystorePassword(String keystorePath, String encodedPassword)
+            throws Exception {
+        char[] password = null;
+        try {
+            KeyStore ks = KeyStoreFileManager.loadKeyStore(keystorePath, encodedPassword);
+        } finally {
+            if (password != null) PasswordObfuscator.flush(password);
+        }
+
+    }
+
+    /**
+     * @param keystorePath
+     * @param keyName
+     * @param encodedPassword
+     * @throws java.security.UnrecoverableKeyException if the password is invalid
+     */
+    public static void validateKeyPassword(String keystorePath, String keyName, String encodedPassword)
+            throws Exception {
+        char[] password = null;
+        try {
+            KeyStore ks = KeyStoreFileManager.loadKeyStore(keystorePath, (char[]) null);
+            password = PasswordObfuscator.getInstance().decodeAliasPassword(keystorePath, keyName, encodedPassword);
+            ks.getKey(keyName, password);
+        } finally {
+            if (password != null) PasswordObfuscator.flush(password);
+        }
+
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/optional/LoadKeystoreException.java

@@ -0,0 +1,25 @@
+
+package kellinwood.security.zipsigner.optional;
+
+import java.io.IOException;
+
+/**
+ * Thrown by JKS.engineLoad() for errors that occur after determining the keystore is actually a JKS keystore.
+ */
+public class LoadKeystoreException extends IOException {
+
+    public LoadKeystoreException() {
+    }
+
+    public LoadKeystoreException(String message) {
+        super(message);
+    }
+
+    public LoadKeystoreException(String message, Throwable cause) {
+        super(message, cause);
+    }
+
+    public LoadKeystoreException(Throwable cause) {
+        super(cause);
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/optional/PasswordObfuscator.java

@@ -0,0 +1,147 @@
+
+package kellinwood.security.zipsigner.optional;
+
+import kellinwood.logging.LoggerInterface;
+import kellinwood.logging.LoggerManager;
+import kellinwood.security.zipsigner.Base64;
+
+import javax.crypto.Cipher;
+import javax.crypto.spec.SecretKeySpec;
+import java.io.BufferedReader;
+import java.io.ByteArrayInputStream;
+import java.io.ByteArrayOutputStream;
+import java.io.InputStreamReader;
+import java.io.OutputStreamWriter;
+import java.io.Writer;
+
+public class PasswordObfuscator {
+
+    private static PasswordObfuscator instance = null;
+
+    static final String x = "harold-and-maude";
+
+    LoggerInterface logger;
+    SecretKeySpec skeySpec;
+
+    private PasswordObfuscator() {
+        logger = LoggerManager.getLogger(PasswordObfuscator.class.getName());
+        skeySpec = new SecretKeySpec(x.getBytes(), "AES");
+    }
+
+    public static PasswordObfuscator getInstance() {
+        if (instance == null) instance = new PasswordObfuscator();
+        return instance;
+    }
+
+    public String encodeKeystorePassword(String keystorePath, String password) {
+        return encode(keystorePath, password);
+    }
+
+    public String encodeKeystorePassword(String keystorePath, char[] password) {
+        return encode(keystorePath, password);
+    }
+
+    public String encodeAliasPassword(String keystorePath, String aliasName, String password) {
+        return encode(keystorePath + aliasName, password);
+    }
+
+    public String encodeAliasPassword(String keystorePath, String aliasName, char[] password) {
+        return encode(keystorePath + aliasName, password);
+    }
+
+    public char[] decodeKeystorePassword(String keystorePath, String password) {
+        return decode(keystorePath, password);
+    }
+
+    public char[] decodeAliasPassword(String keystorePath, String aliasName, String password) {
+        return decode(keystorePath + aliasName, password);
+    }
+
+    public String encode(String junk, String password) {
+        if (password == null) return null;
+        char[] c = password.toCharArray();
+        String result = encode(junk, c);
+        flush(c);
+        return result;
+    }
+
+    /**
+     * <b>This uses the AES-ECB cipher which is known to be insecure</b>
+     *
+     * @see <a href="https://blog.filippo.io/the-ecb-penguin/">The ECB Penguin</a>
+     */
+    @Deprecated
+    @SuppressWarnings("GetInstance")
+    public String encode(String junk, char[] password) {
+        if (password == null) return null;
+        try {
+            // Instantiate the cipher
+            Cipher cipher = Cipher.getInstance("AES/ECB/PKCS5Padding");
+            cipher.init(Cipher.ENCRYPT_MODE, skeySpec);
+            ByteArrayOutputStream baos = new ByteArrayOutputStream();
+            Writer w = new OutputStreamWriter(baos);
+            w.write(junk);
+            w.write(password);
+            w.flush();
+            byte[] encoded = cipher.doFinal(baos.toByteArray());
+            return Base64.encode(encoded);
+        } catch (Exception x) {
+            logger.error("Failed to obfuscate password", x);
+        }
+        return null;
+    }
+
+    /**
+     * <b>This uses the AES-ECB cipher which is known to be insecure</b>
+     *
+     * @see <a href="https://blog.filippo.io/the-ecb-penguin/">The ECB Penguin</a>
+     */
+    @Deprecated
+    @SuppressWarnings("GetInstance")
+    public char[] decode(String junk, String password) {
+        if (password == null) return null;
+        try {
+            // Instantiate the cipher  
+            Cipher cipher = Cipher.getInstance("AES/ECB/PKCS5Padding");
+            SecretKeySpec skeySpec = new SecretKeySpec(x.getBytes(), "AES");
+            cipher.init(Cipher.DECRYPT_MODE, skeySpec);
+            byte[] bytes = cipher.doFinal(Base64.decode(password.getBytes()));
+            BufferedReader r = new BufferedReader(new InputStreamReader(new ByteArrayInputStream(bytes)));
+            char[] cb = new char[128];
+            int length = 0;
+            int numRead;
+            while ((numRead = r.read(cb, length, 128 - length)) != -1) {
+                length += numRead;
+            }
+
+            if (length <= junk.length()) return null;
+
+            char[] result = new char[length - junk.length()];
+            int j = 0;
+            for (int i = junk.length(); i < length; i++) {
+                result[j] = cb[i];
+                j += 1;
+            }
+            flush(cb);
+            return result;
+
+        } catch (Exception x) {
+            logger.error("Failed to decode password", x);
+        }
+        return null;
+    }
+
+    public static void flush(char[] charArray) {
+        if (charArray == null) return;
+        for (int i = 0; i < charArray.length; i++) {
+            charArray[i] = '\0';
+        }
+    }
+
+    public static void flush(byte[] charArray) {
+        if (charArray == null) return;
+        for (int i = 0; i < charArray.length; i++) {
+            charArray[i] = 0;
+        }
+    }
+}

app/src/full/java/kellinwood/security/zipsigner/optional/SignatureBlockGenerator.java

@@ -0,0 +1,63 @@
+
+package kellinwood.security.zipsigner.optional;
+
+import kellinwood.security.zipsigner.KeySet;
+import org.bouncycastle.cert.jcajce.JcaCertStore;
+import org.bouncycastle.cms.CMSProcessableByteArray;
+import org.bouncycastle.cms.CMSSignedData;
+import org.bouncycastle.cms.CMSSignedDataGenerator;
+import org.bouncycastle.cms.CMSTypedData;
+import org.bouncycastle.cms.SignerInfoGenerator;
+import org.bouncycastle.cms.jcajce.JcaSignerInfoGeneratorBuilder;
+import org.bouncycastle.operator.ContentSigner;
+import org.bouncycastle.operator.DigestCalculatorProvider;
+import org.bouncycastle.operator.jcajce.JcaContentSignerBuilder;
+import org.bouncycastle.operator.jcajce.JcaDigestCalculatorProviderBuilder;
+import org.bouncycastle.util.Store;
+
+import java.util.ArrayList;
+import java.util.List;
+
+/**
+ *
+ */
+public class SignatureBlockGenerator {
+
+    /**
+     * Sign the given content using the private and public keys from the keySet, and return the encoded CMS (PKCS#7) data.
+     * Use of direct signature and DER encoding produces a block that is verifiable by Android recovery programs.
+     */
+    public static byte[] generate(KeySet keySet, byte[] content) {
+        try {
+            List certList = new ArrayList();
+            CMSTypedData msg = new CMSProcessableByteArray(content);
+
+            certList.add(keySet.getPublicKey());
+
+            Store certs = new JcaCertStore(certList);
+
+            CMSSignedDataGenerator gen = new CMSSignedDataGenerator();
+
+            JcaContentSignerBuilder jcaContentSignerBuilder = new JcaContentSignerBuilder(keySet.getSignatureAlgorithm()).setProvider("BC");
+            ContentSigner sha1Signer = jcaContentSignerBuilder.build(keySet.getPrivateKey());
+
+            JcaDigestCalculatorProviderBuilder jcaDigestCalculatorProviderBuilder = new JcaDigestCalculatorProviderBuilder().setProvider("BC");
+            DigestCalculatorProvider digestCalculatorProvider = jcaDigestCalculatorProviderBuilder.build();
+
+            JcaSignerInfoGeneratorBuilder jcaSignerInfoGeneratorBuilder = new JcaSignerInfoGeneratorBuilder(digestCalculatorProvider);
+            jcaSignerInfoGeneratorBuilder.setDirectSignature(true);
+            SignerInfoGenerator signerInfoGenerator = jcaSignerInfoGeneratorBuilder.build(sha1Signer, keySet.getPublicKey());
+
+            gen.addSignerInfoGenerator(signerInfoGenerator);
+
+            gen.addCertificates(certs);
+
+            CMSSignedData sigData = gen.generate(msg, false);
+            return sigData.toASN1Structure().getEncoded("DER");
+
+        } catch (Exception x) {
+            throw new RuntimeException(x.getMessage(), x);
+        }
+    }
+
+}

app/src/full/java/kellinwood/zipio/CentralEnd.java

@@ -0,0 +1,105 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.zipio;
+
+import kellinwood.logging.LoggerInterface;
+import kellinwood.logging.LoggerManager;
+
+import java.io.IOException;
+
+public class CentralEnd {
+    public int signature = 0x06054b50; // end of central dir signature    4 bytes
+    public short numberThisDisk = 0;   // number of this disk             2 bytes     
+    public short centralStartDisk = 0; // number of the disk with the start of the central directory  2 bytes
+    public short numCentralEntries;    // total number of entries in the central directory on this disk  2 bytes
+    public short totalCentralEntries;  // total number of entries in the central directory           2 bytes
+
+    public int centralDirectorySize;   // size of the central directory   4 bytes
+    public int centralStartOffset;     // offset of start of central directory with respect to the starting disk number        4 bytes
+    public String fileComment;         // .ZIP file comment       (variable size)
+
+    private static LoggerInterface log;
+
+    public static CentralEnd read(ZipInput input) throws IOException {
+
+        int signature = input.readInt();
+        if (signature != 0x06054b50) {
+            // back up to the signature
+            input.seek(input.getFilePointer() - 4);
+            return null;
+        }
+
+        CentralEnd entry = new CentralEnd();
+
+        entry.doRead(input);
+        return entry;
+    }
+
+    public static LoggerInterface getLogger() {
+        if (log == null) log = LoggerManager.getLogger(CentralEnd.class.getName());
+        return log;
+    }
+
+
+    private void doRead(ZipInput input) throws IOException {
+
+        boolean debug = getLogger().isDebugEnabled();
+
+        numberThisDisk = input.readShort();
+        if (debug) log.debug(String.format("This disk number: 0x%04x", numberThisDisk));
+
+        centralStartDisk = input.readShort();
+        if (debug) log.debug(String.format("Central dir start disk number: 0x%04x", centralStartDisk));
+
+        numCentralEntries = input.readShort();
+        if (debug) log.debug(String.format("Central entries on this disk: 0x%04x", numCentralEntries));
+
+        totalCentralEntries = input.readShort();
+        if (debug) log.debug(String.format("Total number of central entries: 0x%04x", totalCentralEntries));
+
+        centralDirectorySize = input.readInt();
+        if (debug) log.debug(String.format("Central directory size: 0x%08x", centralDirectorySize));
+
+        centralStartOffset = input.readInt();
+        if (debug) log.debug(String.format("Central directory offset: 0x%08x", centralStartOffset));
+
+        short zipFileCommentLen = input.readShort();
+        fileComment = input.readString(zipFileCommentLen);
+        if (debug) log.debug(".ZIP file comment: " + fileComment);
+
+
+    }
+
+
+    public void write(ZipOutput output) throws IOException {
+
+        boolean debug = getLogger().isDebugEnabled();
+
+        output.writeInt(signature);
+        output.writeShort(numberThisDisk);
+        output.writeShort(centralStartDisk);
+        output.writeShort(numCentralEntries);
+        output.writeShort(totalCentralEntries);
+        output.writeInt(centralDirectorySize);
+        output.writeInt(centralStartOffset);
+        output.writeShort((short) fileComment.length());
+        output.writeString(fileComment);
+
+
+    }
+
+}

app/src/full/java/kellinwood/zipio/ZioEntry.java

@@ -0,0 +1,632 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.zipio;
+
+import kellinwood.logging.LoggerInterface;
+import kellinwood.logging.LoggerManager;
+
+import java.io.ByteArrayInputStream;
+import java.io.ByteArrayOutputStream;
+import java.io.File;
+import java.io.IOException;
+import java.io.InputStream;
+import java.io.OutputStream;
+import java.io.SequenceInputStream;
+import java.util.Date;
+import java.util.Locale;
+import java.util.zip.CRC32;
+import java.util.zip.Inflater;
+import java.util.zip.InflaterInputStream;
+
+public class ZioEntry implements Cloneable {
+
+    private ZipInput zipInput;
+
+    // public int signature = 0x02014b50;
+    private short versionMadeBy;
+    private short versionRequired;
+    private short generalPurposeBits;
+    private short compression;
+    private short modificationTime;
+    private short modificationDate;
+    private int crc32;
+    private int compressedSize;
+    private int size;
+    private String filename;
+    private byte[] extraData;
+    private short numAlignBytes = 0;
+    private String fileComment;
+    private short diskNumberStart;
+    private short internalAttributes;
+    private int externalAttributes;
+
+    private int localHeaderOffset;
+    private long dataPosition = -1;
+    private byte[] data = null;
+    private ZioEntryOutputStream entryOut = null;
+
+
+    private static byte[] alignBytes = new byte[4];
+
+    private static LoggerInterface log;
+
+    public ZioEntry(ZipInput input) {
+        zipInput = input;
+    }
+
+    public static LoggerInterface getLogger() {
+        if (log == null) log = LoggerManager.getLogger(ZioEntry.class.getName());
+        return log;
+    }
+
+    public ZioEntry(String name) {
+        filename = name;
+        fileComment = "";
+        compression = 8;
+        extraData = new byte[0];
+        setTime(System.currentTimeMillis());
+    }
+
+
+    public ZioEntry(String name, String sourceDataFile)
+            throws IOException {
+        zipInput = new ZipInput(sourceDataFile);
+        filename = name;
+        fileComment = "";
+        this.compression = 0;
+        this.size = (int) zipInput.getFileLength();
+        this.compressedSize = this.size;
+
+        if (getLogger().isDebugEnabled())
+            getLogger().debug(String.format(Locale.ENGLISH, "Computing CRC for %s, size=%d", sourceDataFile, size));
+
+        // compute CRC
+        CRC32 crc = new CRC32();
+
+        byte[] buffer = new byte[8096];
+
+        int numRead = 0;
+        while (numRead != size) {
+            int count = zipInput.read(buffer, 0, Math.min(buffer.length, (this.size - numRead)));
+            if (count > 0) {
+                crc.update(buffer, 0, count);
+                numRead += count;
+            }
+        }
+
+        this.crc32 = (int) crc.getValue();
+
+        zipInput.seek(0);
+        this.dataPosition = 0;
+        extraData = new byte[0];
+        setTime(new File(sourceDataFile).lastModified());
+    }
+
+
+    public ZioEntry(String name, String sourceDataFile, short compression, int crc32, int compressedSize, int size)
+            throws IOException {
+        zipInput = new ZipInput(sourceDataFile);
+        filename = name;
+        fileComment = "";
+        this.compression = compression;
+        this.crc32 = crc32;
+        this.compressedSize = compressedSize;
+        this.size = size;
+        this.dataPosition = 0;
+        extraData = new byte[0];
+        setTime(new File(sourceDataFile).lastModified());
+    }
+
+    // Return a copy with a new name
+    public ZioEntry getClonedEntry(String newName) {
+
+        ZioEntry clone;
+        try {
+            clone = (ZioEntry) this.clone();
+        } catch (CloneNotSupportedException e) {
+            throw new IllegalStateException("clone() failed!");
+        }
+        clone.setName(newName);
+        return clone;
+    }
+
+    public void readLocalHeader() throws IOException {
+        ZipInput input = zipInput;
+        int tmp;
+        boolean debug = getLogger().isDebugEnabled();
+
+        input.seek(localHeaderOffset);
+
+        if (debug) getLogger().debug(String.format("FILE POSITION: 0x%08x", input.getFilePointer()));
+
+        // 0 	4 	Local file header signature = 0x04034b50
+        int signature = input.readInt();
+        if (signature != 0x04034b50) {
+            throw new IllegalStateException(String.format("Local header not found at pos=0x%08x, file=%s", input.getFilePointer(), filename));
+        }
+
+        // This method is usually called just before the data read, so
+        // its only purpose currently is to position the file pointer
+        // for the data read.  The entry's attributes might also have
+        // been changed since the central dir entry was read (e.g.,
+        // filename), so throw away the values here.
+
+        int tmpInt;
+        short tmpShort;
+
+        // 4 	2 	Version needed to extract (minimum)
+        /* versionRequired */
+        tmpShort = input.readShort();
+        if (debug) log.debug(String.format("Version required: 0x%04x", tmpShort /*versionRequired*/));
+
+        // 6 	2 	General purpose bit flag
+        /* generalPurposeBits */
+        tmpShort = input.readShort();
+        if (debug) log.debug(String.format("General purpose bits: 0x%04x", tmpShort /* generalPurposeBits */));
+
+        // 8 	2 	Compression method
+        /* compression */
+        tmpShort = input.readShort();
+        if (debug) log.debug(String.format("Compression: 0x%04x", tmpShort /* compression */));
+
+        // 10 	2 	File last modification time
+        /* modificationTime */
+        tmpShort = input.readShort();
+        if (debug) log.debug(String.format("Modification time: 0x%04x", tmpShort /* modificationTime */));
+
+        // 12 	2 	File last modification date
+        /* modificationDate */
+        tmpShort = input.readShort();
+        if (debug) log.debug(String.format("Modification date: 0x%04x", tmpShort /* modificationDate */));
+
+        // 14 	4 	CRC-32
+        /* crc32 */
+        tmpInt = input.readInt();
+        if (debug) log.debug(String.format("CRC-32: 0x%04x", tmpInt /*crc32*/));
+
+        // 18 	4 	Compressed size
+        /* compressedSize*/
+        tmpInt = input.readInt();
+        if (debug) log.debug(String.format("Compressed size: 0x%04x", tmpInt /*compressedSize*/));
+
+        // 22 	4 	Uncompressed size
+        /* size */
+        tmpInt = input.readInt();
+        if (debug) log.debug(String.format("Size: 0x%04x", tmpInt /*size*/));
+
+        // 26 	2 	File name length (n)
+        short fileNameLen = input.readShort();
+        if (debug) log.debug(String.format("File name length: 0x%04x", fileNameLen));
+
+        // 28 	2 	Extra field length (m)
+        short extraLen = input.readShort();
+        if (debug) log.debug(String.format("Extra length: 0x%04x", extraLen));
+
+        // 30 	n 	File name      
+        String filename = input.readString(fileNameLen);
+        if (debug) log.debug("Filename: " + filename);
+
+        // Extra data
+        byte[] extra = input.readBytes(extraLen);
+
+        // Record the file position of this entry's data.
+        dataPosition = input.getFilePointer();
+        if (debug) log.debug(String.format("Data position: 0x%08x", dataPosition));
+
+    }
+
+    public void writeLocalEntry(ZipOutput output) throws IOException {
+        if (data == null && dataPosition < 0 && zipInput != null) {
+            readLocalHeader();
+        }
+
+        localHeaderOffset = (int) output.getFilePointer();
+
+        boolean debug = getLogger().isDebugEnabled();
+
+        if (debug) {
+            getLogger().debug(String.format("Writing local header at 0x%08x - %s", localHeaderOffset, filename));
+        }
+
+        if (entryOut != null) {
+            entryOut.close();
+            size = entryOut.getSize();
+            data = ((ByteArrayOutputStream) entryOut.getWrappedStream()).toByteArray();
+            compressedSize = data.length;
+            crc32 = entryOut.getCRC();
+        }
+
+        output.writeInt(0x04034b50);
+        output.writeShort(versionRequired);
+        output.writeShort(generalPurposeBits);
+        output.writeShort(compression);
+        output.writeShort(modificationTime);
+        output.writeShort(modificationDate);
+        output.writeInt(crc32);
+        output.writeInt(compressedSize);
+        output.writeInt(size);
+        output.writeShort((short) filename.length());
+
+        numAlignBytes = 0;
+
+        // Zipalign if the file is uncompressed, i.e., "Stored", and file size is not zero.
+        if (compression == 0) {
+
+            long dataPos = output.getFilePointer() + // current position
+                    2 +                                  // plus size of extra data length
+                    filename.length() +                  // plus filename
+                    extraData.length;                    // plus extra data
+
+            short dataPosMod4 = (short) (dataPos % 4);
+
+            if (dataPosMod4 > 0) {
+                numAlignBytes = (short) (4 - dataPosMod4);
+            }
+        }
+
+
+        // 28 	2 	Extra field length (m)
+        output.writeShort((short) (extraData.length + numAlignBytes));
+
+        // 30 	n 	File name
+        output.writeString(filename);
+
+        // Extra data
+        output.writeBytes(extraData);
+
+        // Zipalign bytes
+        if (numAlignBytes > 0) {
+            output.writeBytes(alignBytes, 0, numAlignBytes);
+        }
+
+        if (debug) getLogger().debug(String.format(Locale.ENGLISH, "Data position 0x%08x", output.getFilePointer()));
+        if (data != null) {
+            output.writeBytes(data);
+            if (debug) getLogger().debug(String.format(Locale.ENGLISH, "Wrote %d bytes", data.length));
+        } else {
+
+            if (debug) getLogger().debug(String.format("Seeking to position 0x%08x", dataPosition));
+            zipInput.seek(dataPosition);
+
+            int bufferSize = Math.min(compressedSize, 8096);
+            byte[] buffer = new byte[bufferSize];
+            long totalCount = 0;
+
+            while (totalCount != compressedSize) {
+                int numRead = zipInput.in.read(buffer, 0, (int) Math.min(compressedSize - totalCount, bufferSize));
+                if (numRead > 0) {
+                    output.writeBytes(buffer, 0, numRead);
+                    if (debug) getLogger().debug(String.format(Locale.ENGLISH, "Wrote %d bytes", numRead));
+                    totalCount += numRead;
+                } else
+                    throw new IllegalStateException(String.format(Locale.ENGLISH, "EOF reached while copying %s with %d bytes left to go", filename, compressedSize - totalCount));
+            }
+        }
+    }
+
+    public static ZioEntry read(ZipInput input) throws IOException {
+
+        // 0    4   Central directory header signature = 0x02014b50
+        int signature = input.readInt();
+        if (signature != 0x02014b50) {
+            // back up to the signature
+            input.seek(input.getFilePointer() - 4);
+            return null;
+        }
+
+        ZioEntry entry = new ZioEntry(input);
+
+        entry.doRead(input);
+        return entry;
+    }
+
+    private void doRead(ZipInput input) throws IOException {
+
+        boolean debug = getLogger().isDebugEnabled();
+
+        // 4    2   Version needed to extract (minimum)
+        versionMadeBy = input.readShort();
+        if (debug) log.debug(String.format("Version made by: 0x%04x", versionMadeBy));
+
+        // 4    2   Version required
+        versionRequired = input.readShort();
+        if (debug) log.debug(String.format("Version required: 0x%04x", versionRequired));
+
+        // 6    2   General purpose bit flag
+        generalPurposeBits = input.readShort();
+        if (debug) log.debug(String.format("General purpose bits: 0x%04x", generalPurposeBits));
+        // Bits 1, 2, 3, and 11 are allowed to be set (first bit is bit zero).  Any others are a problem.
+        if ((generalPurposeBits & 0xF7F1) != 0x0000) {
+            throw new IllegalStateException("Can't handle general purpose bits == " + String.format("0x%04x", generalPurposeBits));
+        }
+
+        // 8    2   Compression method
+        compression = input.readShort();
+        if (debug) log.debug(String.format("Compression: 0x%04x", compression));
+
+        // 10   2   File last modification time
+        modificationTime = input.readShort();
+        if (debug) log.debug(String.format("Modification time: 0x%04x", modificationTime));
+
+        // 12   2   File last modification date
+        modificationDate = input.readShort();
+        if (debug) log.debug(String.format("Modification date: 0x%04x", modificationDate));
+
+        // 14   4   CRC-32
+        crc32 = input.readInt();
+        if (debug) log.debug(String.format("CRC-32: 0x%04x", crc32));
+
+        // 18   4   Compressed size
+        compressedSize = input.readInt();
+        if (debug) log.debug(String.format("Compressed size: 0x%04x", compressedSize));
+
+        // 22   4   Uncompressed size
+        size = input.readInt();
+        if (debug) log.debug(String.format("Size: 0x%04x", size));
+
+        // 26   2   File name length (n)
+        short fileNameLen = input.readShort();
+        if (debug) log.debug(String.format("File name length: 0x%04x", fileNameLen));
+
+        // 28   2   Extra field length (m)
+        short extraLen = input.readShort();
+        if (debug) log.debug(String.format("Extra length: 0x%04x", extraLen));
+
+        short fileCommentLen = input.readShort();
+        if (debug) log.debug(String.format("File comment length: 0x%04x", fileCommentLen));
+
+        diskNumberStart = input.readShort();
+        if (debug) log.debug(String.format("Disk number start: 0x%04x", diskNumberStart));
+
+        internalAttributes = input.readShort();
+        if (debug) log.debug(String.format("Internal attributes: 0x%04x", internalAttributes));
+
+        externalAttributes = input.readInt();
+        if (debug) log.debug(String.format("External attributes: 0x%08x", externalAttributes));
+
+        localHeaderOffset = input.readInt();
+        if (debug) log.debug(String.format("Local header offset: 0x%08x", localHeaderOffset));
+
+        // 30   n   File name      
+        filename = input.readString(fileNameLen);
+        if (debug) log.debug("Filename: " + filename);
+
+        extraData = input.readBytes(extraLen);
+
+        fileComment = input.readString(fileCommentLen);
+        if (debug) log.debug("File comment: " + fileComment);
+
+        generalPurposeBits = (short) (generalPurposeBits & 0x0800); // Don't write a data descriptor, preserve UTF-8 encoded filename bit
+
+        // Don't write zero-length entries with compression.
+        if (size == 0) {
+            compressedSize = 0;
+            compression = 0;
+            crc32 = 0;
+        }
+
+    }
+
+    /**
+     * Returns the entry's data.
+     */
+    public byte[] getData() throws IOException {
+        if (data != null) return data;
+
+        byte[] tmpdata = new byte[size];
+
+        InputStream din = getInputStream();
+        int count = 0;
+
+        while (count != size) {
+            int numRead = din.read(tmpdata, count, size - count);
+            if (numRead < 0)
+                throw new IllegalStateException(String.format(Locale.ENGLISH, "Read failed, expecting %d bytes, got %d instead", size, count));
+            count += numRead;
+        }
+        return tmpdata;
+    }
+
+    // Returns an input stream for reading the entry's data. 
+    public InputStream getInputStream() throws IOException {
+        return getInputStream(null);
+    }
+
+    // Returns an input stream for reading the entry's data. 
+    public InputStream getInputStream(OutputStream monitorStream) throws IOException {
+
+        if (entryOut != null) {
+            entryOut.close();
+            size = entryOut.getSize();
+            data = ((ByteArrayOutputStream) entryOut.getWrappedStream()).toByteArray();
+            compressedSize = data.length;
+            crc32 = entryOut.getCRC();
+            entryOut = null;
+            InputStream rawis = new ByteArrayInputStream(data);
+            if (compression == 0) return rawis;
+            else {
+                // Hacky, inflate using a sequence of input streams that returns 1 byte more than the actual length of the data.  
+                // This extra dummy byte is required by InflaterInputStream when the data doesn't have the header and crc fields (as it is in zip files). 
+                return new InflaterInputStream(new SequenceInputStream(rawis, new ByteArrayInputStream(new byte[1])), new Inflater(true));
+            }
+        }
+
+        ZioEntryInputStream dataStream;
+        dataStream = new ZioEntryInputStream(this);
+        if (monitorStream != null) dataStream.setMonitorStream(monitorStream);
+        if (compression != 0) {
+            // Note: When using nowrap=true with Inflater it is also necessary to provide 
+            // an extra "dummy" byte as input. This is required by the ZLIB native library 
+            // in order to support certain optimizations.
+            dataStream.setReturnDummyByte(true);
+            return new InflaterInputStream(dataStream, new Inflater(true));
+        } else return dataStream;
+    }
+
+    // Returns an output stream for writing an entry's data.
+    public OutputStream getOutputStream() {
+        entryOut = new ZioEntryOutputStream(compression, new ByteArrayOutputStream());
+        return entryOut;
+    }
+
+
+    public void write(ZipOutput output) throws IOException {
+        boolean debug = getLogger().isDebugEnabled();
+
+
+        output.writeInt(0x02014b50);
+        output.writeShort(versionMadeBy);
+        output.writeShort(versionRequired);
+        output.writeShort(generalPurposeBits);
+        output.writeShort(compression);
+        output.writeShort(modificationTime);
+        output.writeShort(modificationDate);
+        output.writeInt(crc32);
+        output.writeInt(compressedSize);
+        output.writeInt(size);
+        output.writeShort((short) filename.length());
+        output.writeShort((short) (extraData.length + numAlignBytes));
+        output.writeShort((short) fileComment.length());
+        output.writeShort(diskNumberStart);
+        output.writeShort(internalAttributes);
+        output.writeInt(externalAttributes);
+        output.writeInt(localHeaderOffset);
+
+        output.writeString(filename);
+        output.writeBytes(extraData);
+        if (numAlignBytes > 0) output.writeBytes(alignBytes, 0, numAlignBytes);
+        output.writeString(fileComment);
+
+    }
+
+    /*
+     * Returns timetamp in Java format
+     */
+    public long getTime() {
+        int year = (int) (((modificationDate >> 9) & 0x007f) + 80);
+        int month = (int) (((modificationDate >> 5) & 0x000f) - 1);
+        int day = (int) (modificationDate & 0x001f);
+        int hour = (int) ((modificationTime >> 11) & 0x001f);
+        int minute = (int) ((modificationTime >> 5) & 0x003f);
+        int seconds = (int) ((modificationTime << 1) & 0x003e);
+        Date d = new Date(year, month, day, hour, minute, seconds);
+        return d.getTime();
+    }
+
+    /*
+     * Set the file timestamp (using a Java time value).
+     */
+    public void setTime(long time) {
+        Date d = new Date(time);
+        long dtime;
+        int year = d.getYear() + 1900;
+        if (year < 1980) {
+            dtime = (1 << 21) | (1 << 16);
+        } else {
+            dtime = (year - 1980) << 25 | (d.getMonth() + 1) << 21 |
+                    d.getDate() << 16 | d.getHours() << 11 | d.getMinutes() << 5 |
+                    d.getSeconds() >> 1;
+        }
+
+        modificationDate = (short) (dtime >> 16);
+        modificationTime = (short) (dtime & 0xFFFF);
+    }
+
+    public boolean isDirectory() {
+        return filename.endsWith("/");
+    }
+
+    public String getName() {
+        return filename;
+    }
+
+    public void setName(String filename) {
+        this.filename = filename;
+    }
+
+    /**
+     * Use 0 (STORED), or 8 (DEFLATE).
+     */
+    public void setCompression(int compression) {
+        this.compression = (short) compression;
+    }
+
+    public short getVersionMadeBy() {
+        return versionMadeBy;
+    }
+
+    public short getVersionRequired() {
+        return versionRequired;
+    }
+
+    public short getGeneralPurposeBits() {
+        return generalPurposeBits;
+    }
+
+    public short getCompression() {
+        return compression;
+    }
+
+    public int getCrc32() {
+        return crc32;
+    }
+
+    public int getCompressedSize() {
+        return compressedSize;
+    }
+
+    public int getSize() {
+        return size;
+    }
+
+    public byte[] getExtraData() {
+        return extraData;
+    }
+
+    public String getFileComment() {
+        return fileComment;
+    }
+
+    public short getDiskNumberStart() {
+        return diskNumberStart;
+    }
+
+    public short getInternalAttributes() {
+        return internalAttributes;
+    }
+
+    public int getExternalAttributes() {
+        return externalAttributes;
+    }
+
+    public int getLocalHeaderOffset() {
+        return localHeaderOffset;
+    }
+
+    public long getDataPosition() {
+        return dataPosition;
+    }
+
+    public ZioEntryOutputStream getEntryOut() {
+        return entryOut;
+    }
+
+    public ZipInput getZipInput() {
+        return zipInput;
+    }
+
+}

app/src/full/java/kellinwood/zipio/ZioEntryInputStream.java

@@ -0,0 +1,141 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.zipio;
+
+import kellinwood.logging.LoggerInterface;
+import kellinwood.logging.LoggerManager;
+
+import java.io.IOException;
+import java.io.InputStream;
+import java.io.OutputStream;
+import java.io.RandomAccessFile;
+import java.util.Locale;
+
+
+/**
+ * Input stream used to read just the data from a zip file entry.
+ */
+public class ZioEntryInputStream extends InputStream {
+
+    RandomAccessFile raf;
+    int size;
+    int offset;
+    LoggerInterface log;
+    boolean debug;
+    boolean returnDummyByte = false;
+    OutputStream monitor = null;
+
+    public ZioEntryInputStream(ZioEntry entry) throws IOException {
+
+        log = LoggerManager.getLogger(this.getClass().getName());
+        debug = log.isDebugEnabled();
+        offset = 0;
+        size = entry.getCompressedSize();
+        raf = entry.getZipInput().in;
+        long dpos = entry.getDataPosition();
+        if (dpos >= 0) {
+            if (debug) log.debug(String.format(Locale.ENGLISH, "Seeking to %d", entry.getDataPosition()));
+            raf.seek(entry.getDataPosition());
+        } else {
+            // seeks to, then reads, the local header, causing the 
+            // file pointer to be positioned at the start of the data.
+            entry.readLocalHeader();
+        }
+
+    }
+
+    public void setReturnDummyByte(boolean returnExtraByte) {
+        returnDummyByte = returnExtraByte;
+    }
+
+    // For debugging, if the monitor is set we write all data read to the monitor.
+    public void setMonitorStream(OutputStream monitorStream) {
+        monitor = monitorStream;
+    }
+
+    @Override
+    public void close() throws IOException {
+    }
+
+    @Override
+    public boolean markSupported() {
+        return false;
+    }
+
+    @Override
+    public int available() throws IOException {
+        int available = size - offset;
+        if (debug) log.debug(String.format(Locale.ENGLISH, "Available = %d", available));
+        if (available == 0 && returnDummyByte) return 1;
+        else return available;
+    }
+
+    @Override
+    public int read() throws IOException {
+        if ((size - offset) == 0) {
+            if (returnDummyByte) {
+                returnDummyByte = false;
+                return 0;
+            } else return -1;
+        }
+        int b = raf.read();
+        if (b >= 0) {
+            if (monitor != null) monitor.write(b);
+            if (debug) log.debug("Read 1 byte");
+            offset += 1;
+        } else if (debug) log.debug("Read 0 bytes");
+        return b;
+    }
+
+    @Override
+    public int read(byte[] b, int off, int len) throws IOException {
+        return readBytes(b, off, len);
+    }
+
+    private int readBytes(byte[] b, int off, int len) throws IOException {
+        if ((size - offset) == 0) {
+            if (returnDummyByte) {
+                returnDummyByte = false;
+                b[off] = 0;
+                return 1;
+            } else return -1;
+        }
+        int numToRead = Math.min(len, available());
+        int numRead = raf.read(b, off, numToRead);
+        if (numRead > 0) {
+            if (monitor != null) monitor.write(b, off, numRead);
+            offset += numRead;
+        }
+        if (debug) log.debug(String.format(Locale.ENGLISH, "Read %d bytes for read(b,%d,%d)", numRead, off, len));
+        return numRead;
+    }
+
+    @Override
+    public int read(byte[] b) throws IOException {
+        return readBytes(b, 0, b.length);
+    }
+
+    @Override
+    public long skip(long n) throws IOException {
+        long numToSkip = Math.min(n, available());
+        raf.seek(raf.getFilePointer() + numToSkip);
+        if (debug) log.debug(String.format(Locale.ENGLISH, "Skipped %d bytes", numToSkip));
+        return numToSkip;
+    }
+}
+
+

app/src/full/java/kellinwood/zipio/ZioEntryOutputStream.java

@@ -0,0 +1,87 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.zipio;
+
+import java.io.IOException;
+import java.io.OutputStream;
+import java.util.zip.CRC32;
+import java.util.zip.Deflater;
+import java.util.zip.DeflaterOutputStream;
+
+public class ZioEntryOutputStream extends OutputStream {
+    int size = 0;  // tracks uncompressed size of data
+    CRC32 crc = new CRC32();
+    int crcValue = 0;
+    OutputStream wrapped;
+    OutputStream downstream;
+    Deflater deflater;
+
+    public ZioEntryOutputStream(int compression, OutputStream wrapped) {
+        this.wrapped = wrapped;
+        if (compression != 0) {
+            deflater = new Deflater(Deflater.BEST_COMPRESSION, true);
+            downstream = new DeflaterOutputStream(wrapped, deflater);
+        } else {
+            downstream = wrapped;
+        }
+    }
+
+    public void close() throws IOException {
+        downstream.flush();
+        downstream.close();
+        crcValue = (int) crc.getValue();
+        if (deflater != null) {
+            deflater.end();
+        }
+    }
+
+    public int getCRC() {
+        return crcValue;
+    }
+
+    public void flush() throws IOException {
+        downstream.flush();
+    }
+
+    public void write(byte[] b) throws IOException {
+        downstream.write(b);
+        crc.update(b);
+        size += b.length;
+    }
+
+    public void write(byte[] b, int off, int len) throws IOException {
+        downstream.write(b, off, len);
+        crc.update(b, off, len);
+        size += len;
+    }
+
+    public void write(int b) throws IOException {
+        downstream.write(b);
+        crc.update(b);
+        size += 1;
+    }
+
+    public int getSize() {
+        return size;
+    }
+
+    public OutputStream getWrappedStream() {
+        return wrapped;
+    }
+
+}
+

app/src/full/java/kellinwood/zipio/ZipInput.java

@@ -0,0 +1,232 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.zipio;
+
+import kellinwood.logging.LoggerInterface;
+import kellinwood.logging.LoggerManager;
+
+import java.io.Closeable;
+import java.io.File;
+import java.io.IOException;
+import java.io.RandomAccessFile;
+import java.util.Collection;
+import java.util.LinkedHashMap;
+import java.util.Locale;
+import java.util.Map;
+import java.util.Set;
+import java.util.TreeSet;
+import java.util.jar.Manifest;
+import java.util.regex.Matcher;
+import java.util.regex.Pattern;
+
+/**
+ *
+ */
+public class ZipInput implements Closeable {
+    static LoggerInterface log;
+
+    public String inputFilename;
+    RandomAccessFile in = null;
+    long fileLength;
+    int scanIterations = 0;
+
+    Map<String, ZioEntry> zioEntries = new LinkedHashMap<String, ZioEntry>();
+    CentralEnd centralEnd;
+    Manifest manifest;
+
+    public ZipInput(String filename) throws IOException {
+        this.inputFilename = filename;
+        in = new RandomAccessFile(new File(inputFilename), "r");
+        fileLength = in.length();
+    }
+
+    private static LoggerInterface getLogger() {
+        if (log == null) log = LoggerManager.getLogger(ZipInput.class.getName());
+        return log;
+    }
+
+    public String getFilename() {
+        return inputFilename;
+    }
+
+    public long getFileLength() {
+        return fileLength;
+    }
+
+    public static ZipInput read(String filename) throws IOException {
+        ZipInput zipInput = new ZipInput(filename);
+        zipInput.doRead();
+        return zipInput;
+    }
+
+
+    public ZioEntry getEntry(String filename) {
+        return zioEntries.get(filename);
+    }
+
+    public Map<String, ZioEntry> getEntries() {
+        return zioEntries;
+    }
+
+    /**
+     * Returns the names of immediate children in the directory with the given name.
+     * The path value must end with a "/" character.  Use a value of "/"
+     * to get the root entries.
+     */
+    public Collection<String> list(String path) {
+        if (!path.endsWith("/")) throw new IllegalArgumentException("Invalid path -- does not end with '/'");
+
+        if (path.startsWith("/")) path = path.substring(1);
+
+        Pattern p = Pattern.compile(String.format("^%s([^/]+/?).*", path));
+
+        Set<String> names = new TreeSet<String>();
+
+        for (String name : zioEntries.keySet()) {
+            Matcher m = p.matcher(name);
+            if (m.matches()) names.add(m.group(1));
+        }
+        return names;
+    }
+
+    public Manifest getManifest() throws IOException {
+        if (manifest == null) {
+            ZioEntry e = zioEntries.get("META-INF/MANIFEST.MF");
+            if (e != null) {
+                manifest = new Manifest(e.getInputStream());
+            }
+        }
+        return manifest;
+    }
+
+    /**
+     * Scan the end of the file for the end of central directory record (EOCDR).
+     * Returns the file offset of the EOCD signature.  The size parameter is an
+     * initial buffer size (e.g., 256).
+     */
+    public long scanForEOCDR(int size) throws IOException {
+        if (size > fileLength || size > 65536)
+            throw new IllegalStateException("End of central directory not found in " + inputFilename);
+
+        int scanSize = (int) Math.min(fileLength, size);
+
+        byte[] scanBuf = new byte[scanSize];
+
+        in.seek(fileLength - scanSize);
+
+        in.readFully(scanBuf);
+
+        for (int i = scanSize - 22; i >= 0; i--) {
+            scanIterations += 1;
+            if (scanBuf[i] == 0x50 && scanBuf[i + 1] == 0x4b && scanBuf[i + 2] == 0x05 && scanBuf[i + 3] == 0x06) {
+                return fileLength - scanSize + i;
+            }
+        }
+
+        return scanForEOCDR(size * 2);
+    }
+
+
+    private void doRead() {
+        try {
+
+            long posEOCDR = scanForEOCDR(256);
+            in.seek(posEOCDR);
+            centralEnd = CentralEnd.read(this);
+
+            boolean debug = getLogger().isDebugEnabled();
+            if (debug) {
+                getLogger().debug(String.format(Locale.ENGLISH, "EOCD found in %d iterations", scanIterations));
+                getLogger().debug(String.format(Locale.ENGLISH, "Directory entries=%d, size=%d, offset=%d/0x%08x", centralEnd.totalCentralEntries,
+                        centralEnd.centralDirectorySize, centralEnd.centralStartOffset, centralEnd.centralStartOffset));
+
+                ZipListingHelper.listHeader(getLogger());
+            }
+
+            in.seek(centralEnd.centralStartOffset);
+
+            for (int i = 0; i < centralEnd.totalCentralEntries; i++) {
+                ZioEntry entry = ZioEntry.read(this);
+                zioEntries.put(entry.getName(), entry);
+                if (debug) ZipListingHelper.listEntry(getLogger(), entry);
+            }
+
+        } catch (Throwable t) {
+            t.printStackTrace();
+        }
+    }
+
+    @Override
+    public void close() {
+        if (in != null) try {
+            in.close();
+        } catch (Throwable t) {
+        }
+    }
+
+    public long getFilePointer() throws IOException {
+        return in.getFilePointer();
+    }
+
+    public void seek(long position) throws IOException {
+        in.seek(position);
+    }
+
+    public byte readByte() throws IOException {
+        return in.readByte();
+    }
+
+    public int readInt() throws IOException {
+        int result = 0;
+        for (int i = 0; i < 4; i++) {
+            result |= (in.readUnsignedByte() << (8 * i));
+        }
+        return result;
+    }
+
+    public short readShort() throws IOException {
+        short result = 0;
+        for (int i = 0; i < 2; i++) {
+            result |= (in.readUnsignedByte() << (8 * i));
+        }
+        return result;
+    }
+
+    public String readString(int length) throws IOException {
+
+        byte[] buffer = new byte[length];
+        for (int i = 0; i < length; i++) {
+            buffer[i] = in.readByte();
+        }
+        return new String(buffer);
+    }
+
+    public byte[] readBytes(int length) throws IOException {
+
+        byte[] buffer = new byte[length];
+        for (int i = 0; i < length; i++) {
+            buffer[i] = in.readByte();
+        }
+        return buffer;
+    }
+
+    public int read(byte[] b, int offset, int length) throws IOException {
+        return in.read(b, offset, length);
+    }
+}
+
+

app/src/full/java/kellinwood/zipio/ZipListingHelper.java

@@ -0,0 +1,53 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.zipio;
+
+import kellinwood.logging.LoggerInterface;
+
+import java.text.DateFormat;
+import java.text.SimpleDateFormat;
+import java.util.Date;
+import java.util.Locale;
+
+/**
+ *
+ */
+public class ZipListingHelper {
+
+    static DateFormat dateFormat = new SimpleDateFormat("MM-dd-yy HH:mm", Locale.ENGLISH);
+
+    public static void listHeader(LoggerInterface log) {
+        log.debug(" Length   Method    Size  Ratio   Date   Time   CRC-32    Name");
+        log.debug("--------  ------  ------- -----   ----   ----   ------    ----");
+
+    }
+
+    public static void listEntry(LoggerInterface log, ZioEntry entry) {
+        int ratio = 0;
+        if (entry.getSize() > 0) ratio = (100 * (entry.getSize() - entry.getCompressedSize())) / entry.getSize();
+        log.debug(String.format(Locale.ENGLISH, "%8d  %6s %8d %4d%% %s  %08x  %s",
+                entry.getSize(),
+                entry.getCompression() == 0 ? "Stored" : "Defl:N",
+                entry.getCompressedSize(),
+                ratio,
+                dateFormat.format(new Date(entry.getTime())),
+                entry.getCrc32(),
+                entry.getName()));
+    }
+}
+
+

app/src/full/java/kellinwood/zipio/ZipOutput.java

@@ -0,0 +1,154 @@
+/*
+ * Copyright (C) 2010 Ken Ellinwood
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+package kellinwood.zipio;
+
+import kellinwood.logging.LoggerInterface;
+import kellinwood.logging.LoggerManager;
+
+import java.io.File;
+import java.io.FileOutputStream;
+import java.io.IOException;
+import java.io.OutputStream;
+import java.util.HashSet;
+import java.util.LinkedList;
+import java.util.List;
+import java.util.Set;
+
+/**
+ *
+ */
+public class ZipOutput {
+
+    static LoggerInterface log;
+
+    String outputFilename;
+    OutputStream out = null;
+    int filePointer = 0;
+
+    List<ZioEntry> entriesWritten = new LinkedList<ZioEntry>();
+    Set<String> namesWritten = new HashSet<String>();
+
+    public ZipOutput(String filename) throws IOException {
+        this.outputFilename = filename;
+        File ofile = new File(outputFilename);
+        init(ofile);
+    }
+
+    public ZipOutput(File outputFile) throws IOException {
+        this.outputFilename = outputFile.getAbsolutePath();
+        File ofile = outputFile;
+        init(ofile);
+    }
+
+    private void init(File ofile) throws IOException {
+        if (ofile.exists()) ofile.delete();
+        out = new FileOutputStream(ofile);
+        if (getLogger().isDebugEnabled()) ZipListingHelper.listHeader(getLogger());
+
+    }
+
+    public ZipOutput(OutputStream os) throws IOException {
+        out = os;
+    }
+
+    private static LoggerInterface getLogger() {
+        if (log == null) log = LoggerManager.getLogger(ZipOutput.class.getName());
+        return log;
+    }
+
+    public void write(ZioEntry entry) throws IOException {
+        String entryName = entry.getName();
+        if (namesWritten.contains(entryName)) {
+            getLogger().warning("Skipping duplicate file in output: " + entryName);
+            return;
+        }
+        entry.writeLocalEntry(this);
+        entriesWritten.add(entry);
+        namesWritten.add(entryName);
+        if (getLogger().isDebugEnabled()) ZipListingHelper.listEntry(getLogger(), entry);
+
+    }
+
+
+    public void close() throws IOException {
+        CentralEnd centralEnd = new CentralEnd();
+
+        centralEnd.centralStartOffset = (int) getFilePointer();
+        centralEnd.numCentralEntries = centralEnd.totalCentralEntries = (short) entriesWritten.size();
+
+        for (ZioEntry entry : entriesWritten) {
+            entry.write(this);
+        }
+
+        centralEnd.centralDirectorySize = (int) (getFilePointer() - centralEnd.centralStartOffset);
+        centralEnd.fileComment = "";
+
+        centralEnd.write(this);
+
+        if (out != null) try {
+            out.close();
+        } catch (Throwable t) {
+        }
+    }
+
+    public int getFilePointer() throws IOException {
+        return filePointer;
+    }
+
+
+    public void writeInt(int value) throws IOException {
+        byte[] data = new byte[4];
+        for (int i = 0; i < 4; i++) {
+            data[i] = (byte) (value & 0xFF);
+            value = value >> 8;
+        }
+        out.write(data);
+        filePointer += 4;
+    }
+
+    public void writeShort(short value) throws IOException {
+        byte[] data = new byte[2];
+        for (int i = 0; i < 2; i++) {
+            data[i] = (byte) (value & 0xFF);
+            value = (short) (value >> 8);
+        }
+        out.write(data);
+        filePointer += 2;
+    }
+
+    public void writeString(String value) throws IOException {
+
+        byte[] data = value.getBytes();
+        out.write(data);
+        filePointer += data.length;
+    }
+
+    public void writeBytes(byte[] value) throws IOException {
+
+        out.write(value);
+        filePointer += value.length;
+    }
+
+    public void writeBytes(byte[] value, int offset, int length) throws IOException {
+
+        out.write(value, offset, length);
+        filePointer += length;
+    }
+
+}
+
+